Working environment to execute GrabCut with earthsim

[maximlt]

I've had to run the grabcut example before adding it to pyviz/examples. Since it was quite tricky to find an environment including earthsim and that worked to execute the notebook, I'm sharing it here:

I had to add that at the top of the notebook to avoid having warnings emitted by param due to some libraries using its deprecated API.

from param.parameterized import Parameters
Parameters._disable_stubs = None

conda env list

name: grabcut
channels:
  - conda-forge
  - defaults
dependencies:
  - affine=2.3.0=py_0
  - appdirs=1.4.4=pyh9f0ad1d_0
  - appnope=0.1.2=py36h79c6626_1
  - argon2-cffi=21.1.0=py36hfa26744_0
  - async_generator=1.10=py_0
  - attrs=21.2.0=pyhd8ed1ab_0
  - backcall=0.2.0=pyh9f0ad1d_0
  - backports=1.0=py36_1
  - backports.functools_lru_cache=1.6.4=pyhd8ed1ab_0
  - beautifulsoup4=4.10.0=pyha770c72_0
  - bleach=4.1.0=pyhd8ed1ab_0
  - blinker=1.4=py_1
  - bokeh=1.4.0=py36h9f0ad1d_1
  - boost-cpp=1.74.0=hbdcdab7_3
  - brotlipy=0.7.0=py36hfa26744_1001
  - bzip2=1.0.8=h0d85af4_4
  - c-ares=1.17.2=h0d85af4_0
  - ca-certificates=2021.10.8=h033912b_0
  - cairo=1.16.0=he43a7df_1008
  - cartopy=0.19.0.post1=py36hb083fcb_1
  - certifi=2021.5.30=py36h79c6626_0
  - cffi=1.14.6=py36hbc36220_1
  - cfitsio=3.470=h01dc385_7
  - cftime=1.5.1=py36h5f094cf_0
  - chardet=4.0.0=py36h79c6626_1
  - charset-normalizer=2.0.0=pyhd8ed1ab_0
  - click=7.1.2=pyh9f0ad1d_0
  - click-plugins=1.1.1=py_0
  - cligj=0.7.2=pyhd8ed1ab_1
  - cloudpickle=2.0.0=pyhd8ed1ab_0
  - colorama=0.4.4=pyh9f0ad1d_0
  - colorcet=2.0.6=pyhd8ed1ab_0
  - contextvars=2.4=py_0
  - cryptography=35.0.0=py36ha6a00b0_0
  - curl=7.79.1=hf45b732_1
  - cycler=0.10.0=py36_0
  - cytoolz=0.11.0=py36hfa26744_3
  - dask=2021.3.0=pyhd8ed1ab_0
  - dask-core=2021.3.0=pyhd8ed1ab_0
  - datashader=0.13.0=pyh6c4a22f_0
  - datashape=0.5.4=py36_0
  - dbus=1.13.6=ha13b53f_2
  - decorator=5.1.0=pyhd8ed1ab_0
  - defusedxml=0.7.1=pyhd8ed1ab_0
  - diskcache=5.2.1=pyh44b312d_0
  - distributed=2021.3.0=py36h79c6626_0
  - earthsim=v1.1.1=py_0
  - entrypoints=0.3=py36h9f0ad1d_1002
  - expat=2.4.1=he49afe7_0
  - ffmpeg=4.4.0=h79e7b16_4
  - fiona=1.8.18=py36h7b341d1_1
  - fontconfig=2.13.1=h10f422b_1005
  - freetype=2.10.4=h4cff582_1
  - freexl=1.0.6=h0d85af4_0
  - fsspec=2021.10.1=pyhd8ed1ab_0
  - future=0.18.2=py36h79c6626_3
  - gdal=3.2.1=py36h549d2a7_7
  - geojson=2.5.0=py_0
  - geopandas=0.9.0=pyhd8ed1ab_1
  - geopandas-base=0.9.0=pyhd8ed1ab_1
  - geos=3.9.1=he49afe7_2
  - geotiff=1.6.0=h4fce3c3_4
  - geoviews=1.6.3=py_0
  - geoviews-core=1.6.3=py_0
  - gettext=0.19.8.1=hd1a6beb_1008
  - giflib=5.2.1=hbcb3906_2
  - girder-client=3.1.6=pyhd8ed1ab_0
  - glib=2.70.0=hcf210ce_1
  - glib-tools=2.70.0=hcf210ce_1
  - gmp=6.2.1=h2e338ed_0
  - gnutls=3.6.13=h756fd2b_1
  - graphite2=1.3.13=h2e338ed_1001
  - harfbuzz=2.9.1=h159f659_1
  - hdf4=4.2.15=hefd3b78_3
  - hdf5=1.10.6=nompi_hc5d9132_1114
  - heapdict=1.0.1=py_0
  - holoviews=1.12.4=py_0
  - hs_restclient=1.3.7=pyh9f0ad1d_0
  - icu=68.1=h74dc148_0
  - idna=3.1=pyhd3deb0d_0
  - imageio=2.9.0=py_0
  - immutables=0.16=py36hfa26744_0
  - importlib-metadata=4.8.1=py36h79c6626_0
  - importlib_metadata=4.8.1=hd8ed1ab_0
  - importlib_resources=5.3.0=pyhd8ed1ab_0
  - ipykernel=5.5.5=py36h495a4c6_0
  - ipython=7.16.1=py36h9cf137f_2
  - ipython_genutils=0.2.0=py36_0
  - ipywidgets=7.6.5=pyhd8ed1ab_0
  - isodate=0.6.0=py_1
  - jasper=1.900.1=h636a363_1006
  - jedi=0.17.2=py36h79c6626_1
  - jinja2=3.0.2=pyhd8ed1ab_0
  - joblib=1.1.0=pyhd8ed1ab_0
  - jpeg=9d=hbcb3906_0
  - json-c=0.15=hcb556a6_0
  - jsonschema=4.1.2=pyhd8ed1ab_0
  - jupyter=1.0.0=py36h79c6626_6
  - jupyter_client=6.1.12=pyhd8ed1ab_0
  - jupyter_console=6.4.0=pyhd8ed1ab_1
  - jupyter_core=4.8.1=py36h79c6626_0
  - jupyterlab_pygments=0.1.2=pyh9f0ad1d_0
  - jupyterlab_widgets=1.0.2=pyhd8ed1ab_0
  - kealib=1.4.14=h31dd65d_2
  - kiwisolver=1.3.1=py36hc61eee1_1
  - krb5=1.19.2=hcfbf3a7_2
  - lame=3.100=h35c211d_1001
  - lcms2=2.12=h577c468_0
  - libblas=3.9.0=12_osx64_openblas
  - libcblas=3.9.0=12_osx64_openblas
  - libclang=11.1.0=default_he082bbe_1
  - libcurl=7.79.1=hf45b732_1
  - libcxx=12.0.1=habf9029_0
  - libdap4=3.20.6=h3e144a0_2
  - libedit=3.1.20191231=h0678c8f_2
  - libev=4.33=haf1e3a3_1
  - libffi=3.4.2=he49afe7_4
  - libgdal=3.2.1=h62a8350_7
  - libgfortran=5.0.0=9_3_0_h6c81a4c_23
  - libgfortran5=9.3.0=h6c81a4c_23
  - libglib=2.70.0=hf1fb8c0_1
  - libiconv=1.16=haf1e3a3_0
  - libkml=1.3.0=h8fd9edb_1014
  - liblapack=3.9.0=12_osx64_openblas
  - liblapacke=3.9.0=12_osx64_openblas
  - libllvm10=10.0.1=h009f743_3
  - libllvm11=11.1.0=hd011deb_2
  - libnetcdf=4.7.4=nompi_h9d8a93f_107
  - libnghttp2=1.43.0=h6f36284_1
  - libopenblas=0.3.18=openmp_h3351f45_0
  - libopencv=4.5.2=py36hc804fc1_0
  - libpng=1.6.37=h7cec526_2
  - libpq=13.3=hea3049e_1
  - libprotobuf=3.15.8=hcf210ce_1
  - librttopo=1.1.0=h5413771_6
  - libsodium=1.0.18=hbcb3906_1
  - libspatialindex=1.9.3=he49afe7_4
  - libspatialite=5.0.1=h395434c_3
  - libssh2=1.10.0=h52ee1ee_2
  - libtiff=4.2.0=h46d1c8c_2
  - libvpx=1.11.0=he49afe7_3
  - libwebp-base=1.2.1=h0d85af4_0
  - libxml2=2.9.12=h93ec3fd_0
  - libxslt=1.1.33=h5739fc3_2
  - libzlib=1.2.11=h9173be1_1013
  - llvm-openmp=12.0.1=hda6cdc1_1
  - llvmlite=0.36.0=py36h6e2eaf8_0
  - locket=0.2.0=py36_1
  - lxml=4.6.3=py36habcf893_0
  - lz4-c=1.9.3=he49afe7_1
  - mapclassify=2.4.3=pyhd8ed1ab_0
  - markdown=3.3.4=pyhd8ed1ab_0
  - markupsafe=2.0.1=py36hfa26744_0
  - matplotlib=3.3.4=py36h79c6626_0
  - matplotlib-base=3.3.4=py36h4ea959b_0
  - mistune=0.8.4=py36hfa26744_1004
  - msgpack-python=1.0.2=py36hc61eee1_1
  - multipledispatch=0.6.0=py_0
  - munch=2.5.0=py_0
  - mysql-common=8.0.25=h694c41f_0
  - mysql-libs=8.0.25=h54f5a68_0
  - nbclient=0.5.4=pyhd8ed1ab_0
  - nbconvert=6.0.7=py36h79c6626_3
  - nbformat=5.1.3=pyhd8ed1ab_0
  - ncurses=6.2=h2e338ed_4
  - nest-asyncio=1.5.1=pyhd8ed1ab_0
  - netcdf4=1.5.6=nompi_py36h8858ec9_102
  - nettle=3.6=hedd7734_0
  - networkx=2.5=py_0
  - notebook=6.1.4=py36h9f0ad1d_1
  - nspr=4.30=hcd9eead_0
  - nss=3.69=h31e2bf1_1
  - numba=0.53.1=py36h91f93d6_1
  - numpy=1.19.5=py36h08b5fde_2
  - oauthlib=3.1.1=pyhd8ed1ab_0
  - olefile=0.46=pyh9f0ad1d_1
  - opencv=4.5.2=py36h79c6626_0
  - openh264=2.1.1=hfd3ada9_0
  - openjpeg=2.4.0=h6e7aa92_1
  - openssl=1.1.1l=h0d85af4_0
  - packaging=21.0=pyhd8ed1ab_0
  - pandas=1.1.5=py36h2be6da3_0
  - pandoc=2.15=h0d85af4_0
  - pandocfilters=1.5.0=pyhd8ed1ab_0
  - panel=0.8.1=pyh9f0ad1d_1
  - param=1.12.0=pyh6c4a22f_0
  - parso=0.7.1=pyh9f0ad1d_0
  - partd=1.2.0=pyhd8ed1ab_0
  - pbr=5.6.0=pyhd8ed1ab_0
  - pcre=8.45=he49afe7_0
  - pexpect=4.8.0=py36h9f0ad1d_1
  - pickleshare=0.7.5=py36h9f0ad1d_1002
  - pillow=8.2.0=py36h154fef6_1
  - pint=0.17=pyhd8ed1ab_1
  - pip=21.3.1=pyhd8ed1ab_0
  - pixman=0.40.0=hbcb3906_0
  - pony=0.7.14=pyhd8ed1ab_0
  - poppler=0.89.0=hd735947_5
  - poppler-data=0.4.11=hd8ed1ab_0
  - postgresql=13.3=he8fe76e_1
  - proj=7.2.0=h78d1473_2
  - prometheus_client=0.11.0=pyhd8ed1ab_0
  - prompt-toolkit=3.0.21=pyha770c72_0
  - prompt_toolkit=3.0.21=hd8ed1ab_0
  - psutil=5.8.0=py36hfa26744_1
  - ptyprocess=0.7.0=pyhd3deb0d_0
  - py-opencv=4.5.2=py36h495a4c6_0
  - pycparser=2.20=pyh9f0ad1d_2
  - pyct=0.4.6=py_0
  - pyct-core=0.4.6=py_0
  - pygments=2.10.0=pyhd8ed1ab_0
  - pyjwt=2.3.0=pyhd8ed1ab_0
  - pyopenssl=21.0.0=pyhd8ed1ab_0
  - pyparsing=2.4.7=pyh9f0ad1d_0
  - pyproj=3.0.1=py36hd24fe16_0
  - pyqt=5.12.3=py36h79c6626_7
  - pyqt-impl=5.12.3=py36hb40023b_7
  - pyqt5-sip=4.19.18=py36h3ffa6ac_7
  - pyqtchart=5.12=py36hb40023b_7
  - pyqtwebengine=5.12.1=py36hb40023b_7
  - pyrsistent=0.17.3=py36hfa26744_2
  - pyshp=2.1.3=pyh44b312d_0
  - pysocks=1.7.1=py36h79c6626_3
  - python=3.6.13=haf480d7_2_cpython
  - python-dateutil=2.8.2=pyhd8ed1ab_0
  - python_abi=3.6=2_cp36m
  - pytz=2021.3=pyhd8ed1ab_0
  - pyviz_comms=2.1.0=pyhd8ed1ab_0
  - pyyaml=5.4.1=py36hfa26744_1
  - pyzmq=22.3.0=py36h50cd92c_0
  - qt=5.12.9=h126340a_4
  - qtconsole=5.1.1=pyhd8ed1ab_0
  - qtpy=1.11.2=pyhd8ed1ab_0
  - quest=3.1.1=py_0
  - rasterio=1.2.6=py36hee05335_0
  - readline=8.1=h05e3726_0
  - requests=2.26.0=pyhd8ed1ab_0
  - requests-oauthlib=1.3.0=pyh9f0ad1d_0
  - requests-toolbelt=0.9.1=py_0
  - rtree=0.9.7=py36h49c2f37_1
  - scikit-learn=0.24.2=py36h979b75d_1
  - scipy=1.5.3=py36h4f136de_1
  - send2trash=1.8.0=pyhd8ed1ab_0
  - setuptools=58.0.4=py36h79c6626_2
  - shapely=1.7.1=py36h3e62370_5
  - six=1.16.0=pyh6c4a22f_0
  - snuggs=1.4.7=py_0
  - sortedcontainers=2.4.0=pyhd8ed1ab_0
  - soupsieve=2.0.1=py36h9f0ad1d_0
  - sqlite=3.36.0=h23a322b_2
  - suds-jurko=0.6=py36h79c6626_1005
  - tblib=1.7.0=pyhd8ed1ab_0
  - terminado=0.12.1=py36h79c6626_0
  - testpath=0.5.0=pyhd8ed1ab_0
  - threadpoolctl=3.0.0=pyh8a188c0_0
  - tiledb=2.2.9=he9a4fb4_0
  - tk=8.6.11=h5dbffcc_1
  - toolz=0.11.1=py_0
  - tornado=5.1.1=py36h1de35cc_1000
  - tqdm=4.62.3=pyhd8ed1ab_0
  - traitlets=4.3.3=py36h9f0ad1d_1
  - typing-extensions=3.10.0.2=hd8ed1ab_0
  - typing_extensions=3.10.0.2=pyha770c72_0
  - tzcode=2021e=h0d85af4_0
  - tzdata=2021e=he74cb21_0
  - ulmo=0.8.8=pyh6c4a22f_0
  - urllib3=1.26.7=pyhd8ed1ab_0
  - wcwidth=0.2.5=pyh9f0ad1d_2
  - webencodings=0.5.1=py36_0
  - wheel=0.37.0=pyhd8ed1ab_1
  - whitebox_tools=0.8.0dev=py36_0
  - widgetsnbextension=3.5.1=py36h79c6626_4
  - x264=1!161.3030=h0d85af4_1
  - x265=3.5=h940c156_1
  - xarray=0.18.2=pyhd8ed1ab_0
  - xerces-c=3.2.3=h379762d_3
  - xmscore=3.1.1=py36h78944f7_0
  - xmsgrid=4.2.0=py36hab369eb_2
  - xmsinterp=3.1.0=py36h547e0c7_0
  - xmsmesher=1.0.3=py36h547e0c7_0
  - xz=5.2.5=haf1e3a3_1
  - yaml=0.2.5=haf1e3a3_0
  - zeromq=4.3.4=he49afe7_1
  - zict=2.0.0=py_0
  - zipp=3.6.0=pyhd8ed1ab_0
  - zlib=1.2.11=h9173be1_1013
  - zstd=1.4.9=h582d3a0_0

conda list --explicit

# This file may be used to create an environment using:
# $ conda create --name <env> --file <this file>
# platform: osx-64
@EXPLICIT
https://conda.anaconda.org/conda-forge/osx-64/jbig-2.1-h0d85af4_2003.tar.bz2
https://conda.anaconda.org/conda-forge/osx-64/libdeflate-1.8-h0d85af4_0.tar.bz2
https://conda.anaconda.org/conda-forge/osx-64/bzip2-1.0.8-h0d85af4_4.tar.bz2
https://conda.anaconda.org/conda-forge/osx-64/c-ares-1.18.1-h0d85af4_0.tar.bz2
https://conda.anaconda.org/conda-forge/osx-64/ca-certificates-2021.10.8-h033912b_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/font-ttf-dejavu-sans-mono-2.37-hab24e00_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/font-ttf-inconsolata-3.000-h77eed37_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/font-ttf-source-code-pro-2.038-h77eed37_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/font-ttf-ubuntu-0.83-hab24e00_0.tar.bz2
https://conda.anaconda.org/conda-forge/osx-64/freexl-1.0.6-h0d85af4_0.tar.bz2
https://conda.anaconda.org/conda-forge/osx-64/giflib-5.2.1-hbcb3906_2.tar.bz2
https://conda.anaconda.org/conda-forge/osx-64/jpeg-9d-hbcb3906_0.tar.bz2
https://conda.anaconda.org/conda-forge/osx-64/json-c-0.15-hcb556a6_0.tar.bz2
https://conda.anaconda.org/conda-forge/osx-64/lame-3.100-h35c211d_1001.tar.bz2
https://conda.anaconda.org/conda-forge/osx-64/libcxx-12.0.1-habf9029_0.tar.bz2
https://conda.anaconda.org/conda-forge/osx-64/libev-4.33-haf1e3a3_1.tar.bz2
https://conda.anaconda.org/conda-forge/osx-64/libffi-3.4.2-h0d85af4_5.tar.bz2
https://conda.anaconda.org/conda-forge/osx-64/libiconv-1.16-haf1e3a3_0.tar.bz2
https://conda.anaconda.org/conda-forge/osx-64/libsodium-1.0.18-hbcb3906_1.tar.bz2
https://conda.anaconda.org/conda-forge/osx-64/libwebp-base-1.2.1-h0d85af4_0.tar.bz2
https://conda.anaconda.org/conda-forge/osx-64/libzlib-1.2.11-h9173be1_1013.tar.bz2
https://conda.anaconda.org/conda-forge/osx-64/llvm-openmp-12.0.1-hda6cdc1_1.tar.bz2
https://conda.anaconda.org/conda-forge/osx-64/mysql-common-8.0.25-h694c41f_0.tar.bz2
https://conda.anaconda.org/conda-forge/osx-64/ncurses-6.2-h2e338ed_4.tar.bz2
https://conda.anaconda.org/conda-forge/osx-64/nettle-3.6-hedd7734_0.tar.bz2
https://conda.anaconda.org/conda-forge/osx-64/pandoc-2.16.1-h0d85af4_0.tar.bz2
https://conda.anaconda.org/conda-forge/osx-64/pixman-0.40.0-hbcb3906_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/poppler-data-0.4.11-hd8ed1ab_0.tar.bz2
https://conda.anaconda.org/conda-forge/osx-64/tzcode-2021e-h0d85af4_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/tzdata-2021e-he74cb21_0.tar.bz2
https://conda.anaconda.org/conda-forge/osx-64/x264-1!161.3030-h0d85af4_1.tar.bz2
https://conda.anaconda.org/conda-forge/osx-64/xz-5.2.5-haf1e3a3_1.tar.bz2
https://conda.anaconda.org/conda-forge/osx-64/yaml-0.2.5-haf1e3a3_0.tar.bz2
https://conda.anaconda.org/conda-forge/osx-64/aom-3.2.0-he49afe7_2.tar.bz2
https://conda.anaconda.org/conda-forge/osx-64/expat-2.4.1-he49afe7_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/fonts-conda-forge-1-0.tar.bz2
https://conda.anaconda.org/conda-forge/osx-64/geos-3.9.1-he49afe7_2.tar.bz2
https://conda.anaconda.org/conda-forge/osx-64/gettext-0.19.8.1-hd1a6beb_1008.tar.bz2
https://conda.anaconda.org/conda-forge/osx-64/gmp-6.2.1-h2e338ed_0.tar.bz2
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