One error occurred when using make in the :~/Software/CESAR2.0/kent/src dictionary.

[lirui-max]

One error occurred when using make in the :~/Software/CESAR2.0/kent/src dictionary.

cd axtChain && echo axtChain && make
axtChain
make[2]: Entering directory '/home/chenmx/Software/CESAR2.0/kent/src/hg/mouseStuff/axtChain'
/home/chenmx/miniconda/bin/x86_64-conda-linux-gnu-cc -O -g -o ../../../../bin//axtChain axtChain.o ../../../lib/x86_64/jkhgap.a ../../../lib/x86_64/jkweb.a -lpthread /usr/lib/x86_64-linux-gnu/libssl.a -lcrypto ../../../htslib/libhts.a -lm -lz
/home/chenmx/miniconda/bin/../lib/gcc/x86_64-conda-linux-gnu/11.2.0/../../../../x86_64-conda-linux-gnu/bin/ld: ../../../lib/x86_64/jkweb.a(htmshell.o):/home/chenmx/Software/CESAR2.0/kent/src/lib/../inc/htmshell.h:163: multiple definition of htmlRecover'; ../../../lib/x86_64/jkweb.a(cheapcgi.o):/home/chenmx/Software/CESAR2.0/kent/src/lib/../inc/htmshell.h:163: first defined here /home/chenmx/miniconda/bin/../lib/gcc/x86_64-conda-linux-gnu/11.2.0/../../../../x86_64-conda-linux-gnu/bin/ld: ../../../lib/x86_64/jkweb.a(portimpl.o):/home/chenmx/Software/CESAR2.0/kent/src/lib/../inc/htmshell.h:163: multiple definition of htmlRecover'; ../../../lib/x86_64/jkweb.a(cheapcgi.o):/home/chenmx/Software/CESAR2.0/kent/src/lib/../inc/htmshell.h:163: first defined here
/home/chenmx/miniconda/bin/../lib/gcc/x86_64-conda-linux-gnu/11.2.0/../../../../x86_64-conda-linux-gnu/bin/ld: cannot find -lcrypto: No such file or directory
/home/chenmx/miniconda/bin/../lib/gcc/x86_64-conda-linux-gnu/11.2.0/../../../../x86_64-conda-linux-gnu/bin/ld: cannot find -lz: No such file or directory
collect2: error: ld returned 1 exit status
make[2]: *** [../../../inc/userApp.mk:31: ../../../../bin//axtChain] Error 1
make[2]: Leaving directory '/home/chenmx/Software/CESAR2.0/kent/src/hg/mouseStuff/axtChain'
make[1]: *** [makefile:54: axtChain.all] Error 2
make[1]: Leaving directory '/home/chenmx/Software/CESAR2.0/kent/src/hg/mouseStuff'
make: *** [makefile:22: userApps] Error 2

[MichaelHiller]

Looks like libcrypto and zlib is not installed.

Pls google this error with the operation system that you use. There are a lot of pages with solutions, e.g. for Ubuntu
sudo apt-get install zlib1g-dev