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Merge pull request #20 from albarema/main
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update home page
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albarema authored Aug 13, 2024
2 parents aaaf3f2 + da944c7 commit d1272b4
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6 changes: 6 additions & 0 deletions css/materialight.scss
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.grid-cell img {
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49 changes: 39 additions & 10 deletions index.qmd
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html:
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bibliography: resources/references.bib
---

# Welcome to the Health Data Science Sandbox {.centered}

<div style="text-align: center;">
### A collaborative project with team members spanning five Danish universities
<div style="text-align: center; padding:4px; background-color: #f0f0f0;">
### Access our training modules
</div>

&nbsp;

![](images/Sandbox_workflow_ai_horizontal2w-01.png){fig-align="center"}


The Health Data Science Sandbox is a national project coordinated by the [Center for Health Data Science](https://heads.ku.dk/) at the University of Copenhagen. We're working with a network of health data science experts to build training resources on academic supercomputers for students and researchers in Denmark. Our Sandbox contains [training modules](modules/index.qmd) that pair topical datasets with recommended analysis tools, pipelines, and learning materials/tutorials in a portable, containerized format.

::: {layout-nrow=1 layout-ncol=5}
::: {layout-nrow=1 layout-ncol=5 .layout-border}
::: {.column}
[![HPC Lab](../images/HPC.png){class="hover-target" width="100%"}](https://hds-sandbox.github.io/modules/#sandbox-hpc)
**<span style="display: block; margin-top:15px; text-align: center; font-size: 1.2em;">HPC Lab</span>**

<div style="text-align: center;">
HPC launch
HPC pipes
RDM
</div>
:::

::: {.column}
[![](../images/genomics2.png){class="hover-target" width="100%"}](https://hds-sandbox.github.io/modules/#genomics)
**<span style="display: block; margin-top:15px; text-align: center; font-size: 1.2em;">Genomics</span>**

<div style="text-align: center;">
NGS data analysis
Population Genomics
GWAS
</div>
:::

::: {.column}
[![](../images/transcriptomics.png){class="hover-target" width="100%"}](https://hds-sandbox.github.io/modules/#transcriptomics)
**<span style="display: block; margin-top:15px; text-align: center; font-size: 1.2em;">Transcriptomics</span>**

<div style="text-align: center;">
Bulk RNAseq
Single-cell RNAseq
</div>
:::

::: {.column}
[![](../images/proteomics.png){class="hover-target" width="100%"}](https://hds-sandbox.github.io/modules/#proteomics)
**<span style="display: block; margin-top:15px; text-align: center; font-size: 1.2em;">Proteomics</span>**

<div style="text-align: center;">
Clinical Proteomics
ColabFold
</div>
:::

::: {.column}
[![](../images/EHRs.png){class="hover-target" width="100%"}](https://hds-sandbox.github.io/modules/##EHC)
**<span style="display: block; margin-top:15px; text-align: center; font-size: 1.2em;">Health records</span>**
<div style="text-align: center;">
Synthetic data
Personalized Medicine
</div>

:::
:::

&nbsp;

<div style="text-align: center;">
### We are a collaborative project with team members spanning five Danish universities
</div>

The Health Data Science Sandbox is a national project coordinated by the [Center for Health Data Science](https://heads.ku.dk/) at the University of Copenhagen. We're working with a network of health data science experts to build training resources on academic supercomputers for students and researchers in Denmark. Our Sandbox contains [training modules](modules/index.qmd) that pair topical datasets with recommended analysis tools, pipelines, and learning materials/tutorials in a portable, containerized format.

![](images/Sandbox_workflow_ai_horizontal2w-01.png){fig-align="center"}

<div style="text-align: center;">
### To get involved as a trainee, researcher, or educator in Denmark:
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