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Optimal Setting for maxsnp Parameter #108

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zishanw opened this issue Aug 27, 2024 · 0 comments
Open

Optimal Setting for maxsnp Parameter #108

zishanw opened this issue Aug 27, 2024 · 0 comments

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@zishanw
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zishanw commented Aug 27, 2024 •
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Hi, I have a question regarding the setting of the maxsnp parameter in the software. If I am working with a window size of 10kb and the average number of SNPs in a 10kb window across the whole genome is around 50, would it be appropriate to set maxsnp to 50? Or do you have any other recommendations?
@zishanw zishanw changed the title Which column is used to analyze the selective region Optimal Setting for maxsnp Parameter Aug 27, 2024
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