introniC v1.0.14

intronIC v1.0.14

• Uses human U2-type BPS PWM (data from Pineda 2018) by default.
  To restore the previous paradigm wherein U2-type BPS PWMs are
  generated on-the-fly using the best match to U12-type BPS motifs
  in likely U2-type introns, pass --generate_u2_bps_pwm.

intronIC v1.0.13

intronIC v1.0.13

• Add best U2-type BPS to meta.iic output file.
  Previously, only the best U12-type BPS sequence was reported. In certain cases, it may be useful to know which U2-type sequence was used in determining the BPS log-ratio score.
• Reduce formatting stringency for custom PWMs
  This should reduce headaches if folks are adding their own PWMs by ignoring case, etc.
• Add clause to terminate multiprocessing pool processes on forced exit
  There were cases I'd noticed in my own usage when force-exiting (e.g. via ctrl-c) where zombie processes would persist. Wrapping the whole thing in a try/except/finally seems to eliminate the issue (limited testing).

intronIC v1.0.12 - initial Zenodo release

Manual release to trigger Zenodo archive. No functional difference between this and previous version (v1.0.11).