Skip to content

issues Search Results · repo:gitter-lab/influenza-pb2 language:Python

Filter by

8 results
 (50 ms)

8 results

ingitter-lab/influenza-pb2 (press backspace or delete to remove)

The package could be released on PyPI. The only remaining improvements needed would be adding additional metadata to setup.py. The flopro package name is not in use on PyPI https://pypi.org/search/?q=flopro ...
  • agitter
  • Opened 
    on Nov 25, 2022
  • #9

The flopro package and scripts have initially been developed and tested on Linux. The main flow algorithm runs on Windows with the --flow-only argument, but the full visualization pipeline did not during ...
  • agitter
  • Opened 
    on Nov 25, 2022
  • #8

flow.py is the most important Python script. We can review the comments and documentation to confirm they are accurate with respect to the latest code, resolve TODOs, and add detail as needed.
  • agitter
  • Opened 
    on Aug 26, 2020
  • #6

Once the repository contents stabilize, we can request that it is archived at https://archive.softwareheritage.org/save/
  • agitter
  • 4
  • Opened 
    on Aug 25, 2020
  • #5

Sources are from https://doi.org/10.1074/mcp.M113.028977. Targets are from https://doi.org/10.1038/nature18631.
  • agitter
  • Opened 
    on Aug 25, 2020
  • #4

We can test a fresh installation using requirements.txt
  • agitter
  • Opened 
    on Aug 25, 2020
  • #3

We can show how to use flow.py to run with the PB2 interactor sources and host factor targets. The source and target files are already included in the repository. We would need to provide the STRING network ...
  • agitter
  • Opened 
    on Aug 25, 2020
  • #2

The current name ppi is a placeholder.
  • agitter
  • Opened 
    on Aug 25, 2020
  • #1
Issue origami icon

Learn how you can use GitHub Issues to plan and track your work.

Save views for sprints, backlogs, teams, or releases. Rank, sort, and filter issues to suit the occasion. The possibilities are endless.Learn more about GitHub Issues
ProTip! 
Press the
/
key to activate the search input again and adjust your query.
Issue origami icon

Learn how you can use GitHub Issues to plan and track your work.

Save views for sprints, backlogs, teams, or releases. Rank, sort, and filter issues to suit the occasion. The possibilities are endless.Learn more about GitHub Issues
ProTip! 
Restrict your search to the title by using the in:title qualifier.
Issue search results · GitHub