diff --git a/.github/workflows/install-test.yml b/.github/workflows/install-test.yml index b9ca9f5..026bc36 100644 --- a/.github/workflows/install-test.yml +++ b/.github/workflows/install-test.yml @@ -98,7 +98,9 @@ jobs: tar -xf SINGE_mac.tgz - name: Run and test SINGE shell: bash -l {0} + env: + MATLAB_RUNTIME_PATH: ${{ steps.setup-matlab.outputs.matlabroot }} run: | - bash SINGE.sh ${{ steps.setup-matlab.outputs.matlabroot }} standalone data1/X_SCODE_data.mat data1/gene_list.mat Output tests/example_hyperparameters.txt + bash SINGE.sh $MATLAB_RUNTIME_PATH standalone data1/X_SCODE_data.mat data1/gene_list.mat Output tests/example_hyperparameters.txt ls -l Output bash tests/compare_example_output.sh Output tests/reference/latest 1e-02 1e-02