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Voxel feature center #7

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tonychenxyz opened this issue Nov 16, 2022 · 1 comment
Open

Voxel feature center #7

tonychenxyz opened this issue Nov 16, 2022 · 1 comment

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@tonychenxyz
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It seems that voxel features are computed with mutation site to be the center. I wonder how would it impact model performance if we fix center of voxel features so voxels are aligned in terms of spatial orientation?

@computbiolgeek
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computbiolgeek commented Nov 25, 2022

Hello, thanks for your question. Sorry about the late reply. If I understand your question correctly, when one uses the Rosetta-based script rosetta_relax.py to generate the mutant structure, the mutant structure will have the same orientation as the wild-type structure. So in a sense, the voxels are already aligned. However, the current implementation is not rotation invariant, and we hope to make improvements in a future version.

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