From ee1966f075335956799bd6b0355e35f34640a397 Mon Sep 17 00:00:00 2001
From: Thorin Tabor <tmtabor@users.noreply.github.com>
Date: Wed, 18 Dec 2024 10:01:52 -0800
Subject: [PATCH] Update default memory and cpu count

---
 manifest | 4 +++-
 1 file changed, 3 insertions(+), 1 deletion(-)

diff --git a/manifest b/manifest
index 0a83e7d..6dc8063 100644
--- a/manifest
+++ b/manifest
@@ -6,6 +6,8 @@ author=Thorin Tabor;UCSD - Mesirov Lab
 categories=spatial transcriptomics
 commandLine=Rscript /spatialGE/wrapper.R -f <input.file> -g <gene.sets.database> -p <permutations> -r <random.seed> -s <minimum.spots> -m <minimum.genes> -d <standard.deviations> -w <filter.p.values> -i <filter.gene.proportion>
 job.docker.image=genepattern/spatialge-stenrich:0.4
+job.cpuCount=7
+job.memory=4Gb
 src.repo=https://github.com/genepattern/spatialGE.STenrich
 cpuType=any
 description=Detect genes showing spatial expression patterns (e.g., hotspots). Tests if spots/cells with high average expression of a gene set shows evidence of spatial aggregation.
@@ -147,4 +149,4 @@ quality=development
 taskDoc=
 taskType=spatial transcriptomics
 userid=tabor
-version=Write stlist rds to disk
\ No newline at end of file
+version=Write stlist rds to disk