From dd266d43459cf2b047b246aa0036ba3e5ea60589 Mon Sep 17 00:00:00 2001 From: Engy Nasr Date: Fri, 15 Mar 2024 12:57:28 +0100 Subject: [PATCH 1/2] Update tutorial.md --- topics/genome-annotation/tutorials/gene-centric/tutorial.md | 6 ++++++ 1 file changed, 6 insertions(+) diff --git a/topics/genome-annotation/tutorials/gene-centric/tutorial.md b/topics/genome-annotation/tutorials/gene-centric/tutorial.md index 65c28b066fe24f..51b299bf7620ba 100644 --- a/topics/genome-annotation/tutorials/gene-centric/tutorial.md +++ b/topics/genome-annotation/tutorials/gene-centric/tutorial.md @@ -35,6 +35,12 @@ requirements: abbreviations: ORF: Open Reading Frame priority: 2 +edam_ontology: +- topic_0622 # Genomics +- topic_3301 # Microbiology +- topic_0623 # Gene and protein families +- topic_0080 # Sequence analysis +- topic_0084 # Phylogeny --- Despite the rapidly increasing number of fully assembled genomes few genomes are well annotated. This is especially true for large eukaryotic genomes with their complex gene structure and abundance of pseudogenes. And of course do not forget about the [Murthy's law](https://en.wikipedia.org/wiki/Murphy%27s_law): if you are interested in a particular gene the chances are that it will not be annotated in your genome of interest. In this tutorial we will demonstrate how to compare gene structures across a set of vertebrate genomes. So ... From 95f22346789de82e5c4cba47c0d5a106f32246fc Mon Sep 17 00:00:00 2001 From: Engy Nasr Date: Mon, 18 Mar 2024 09:42:18 +0100 Subject: [PATCH 2/2] Update topics/genome-annotation/tutorials/gene-centric/tutorial.md MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit Co-authored-by: Bérénice Batut --- topics/genome-annotation/tutorials/gene-centric/tutorial.md | 1 - 1 file changed, 1 deletion(-) diff --git a/topics/genome-annotation/tutorials/gene-centric/tutorial.md b/topics/genome-annotation/tutorials/gene-centric/tutorial.md index 51b299bf7620ba..1404e11768674c 100644 --- a/topics/genome-annotation/tutorials/gene-centric/tutorial.md +++ b/topics/genome-annotation/tutorials/gene-centric/tutorial.md @@ -37,7 +37,6 @@ abbreviations: priority: 2 edam_ontology: - topic_0622 # Genomics -- topic_3301 # Microbiology - topic_0623 # Gene and protein families - topic_0080 # Sequence analysis - topic_0084 # Phylogeny