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Alternative DESeq2 hands-on for ref-based RNA-seq tutorial #4833

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merged 3 commits into from
Mar 15, 2024

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pavanvidem
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Choose your own tutorial for DESeq2 run. The current DESeq2 hands-on based on collection inputs with tags is not for everyone. It also needs 3 more steps to prepare the data for DESeq2. In most cases, users have only one factor with ~3 replicates to deal with. A basic datasets-based DESeq2 run should be sufficient.

@pavanvidem pavanvidem requested a review from a team as a code owner March 14, 2024 18:42
@pavanvidem
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When I tested locally, both the divs were displayed by default. Am I doing something wrong?

@bebatut
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bebatut commented Mar 15, 2024

It should be fixed now

@bebatut bebatut merged commit cfcc39f into galaxyproject:main Mar 15, 2024
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2 participants