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rework more FAQs
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@shiltemann
shiltemann committed Nov 27, 2023
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5 changes: 5 additions & 0 deletions faqs/galaxy/workflows_import.md
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Expand Up @@ -12,3 +12,8 @@ contributors: [shiltemann,mblue9,hexylena]
- Option 1: Paste the URL of the workflow into the box labelled *"Archived Workflow URL"*
- Option 2: Upload the workflow file in the box labelled *"Archived Workflow File"*
- Click the **Import workflow** button

Below is a short video demonstrating how to import a workflow from GitHub using this procedure:

<p align="center"><iframe width="560" height="315" src="https://www.youtube-nocookie.com/embed/hoP36Te5wko" title="YouTube video player" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture; web-share" allowfullscreen></iframe></p>

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Instead of embedding IFrames to YouTube contents, consider adding this video to the [GTN Video Library](https://github.com/gallantries/video-library/issues/) where it will be more visible for others.

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{"message":"Instead of embedding IFrames to YouTube contents, consider adding this video to the [GTN Video Library](https://github.com/gallantries/video-library/issues/) where it will be more visible for others.","location":{"path":"./faqs/galaxy/workflows_import.md","range":{"start":{"line":18,"column":19},"end":{"line":18,"column":287}}},"severity":"WARNING","code":{"value":"GTN:002","url":"https://github.com/galaxyproject/training-material/wiki/Error-Codes#gtn002"},"suggestions":[{"text":"","range":{"start":{"line":18,"column":19},"end":{"line":18,"column":287}}}]}

34 changes: 15 additions & 19 deletions faqs/galaxy/workflows_import_from_dockstore.md
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Expand Up @@ -8,23 +8,19 @@ contributors: [nekrut]

[Dockstore](https://dockstore.org/) is a free and open source platform for sharing reusable and scalable analytical tools and workflows.

> <hands-on-title>Import a workflow from DockStore</hands-on-title>
>
>> <warning-title>Make sure you are logged in!</warning-title>
>> Ensure that you are logged in into your Galaxy account!
> {: .warning}
>
> <br>
>
> 1. Go to [DockStore](https://dockstore.org).
> 2. Select any Galaxy workflow you want to import.
> 3. Click on "Galaxy" dropdown within the "Launch with" panel located in the upper right corner.
> 4. Select a galaxy instance you want to launch this workflow with.
> 5. You will be redirected to Galaxy and presented with a list of workflow versions.
> 6. Click the version you want (usually the latest labelled as "main")
> 7. You are done!
>
> The following short video walks you through this uncomplicated procedure:
>
> <p align="center"><iframe width="560" height="315" src="https://www.youtube-nocookie.com/embed/K2wFrSLFpa0" title="YouTube video player" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture; web-share" allowfullscreen></iframe></p>
1. Go to [DockStore](https://dockstore.org).
2. Select any Galaxy workflow you want to import.
3. Click on "Galaxy" dropdown within the "Launch with" panel located in the upper right corner.
4. Select a galaxy instance you want to launch this workflow with.
5. You will be redirected to Galaxy and presented with a list of workflow versions.
6. Click the version you want (usually the latest labelled as "main")
7. You are done!

> <warning-title>Make sure you are logged in!</warning-title>
> Ensure that you are logged in into your Galaxy account!
{: .warning}

The following short video walks you through this uncomplicated procedure:

<p align="center"><iframe width="560" height="315" src="https://www.youtube-nocookie.com/embed/K2wFrSLFpa0" title="YouTube video player" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture; web-share" allowfullscreen></iframe></p>

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[rdjsonl] reported by reviewdog 🐶
Instead of embedding IFrames to YouTube contents, consider adding this video to the [GTN Video Library](https://github.com/gallantries/video-library/issues/) where it will be more visible for others.

Raw Output:
{"message":"Instead of embedding IFrames to YouTube contents, consider adding this video to the [GTN Video Library](https://github.com/gallantries/video-library/issues/) where it will be more visible for others.","location":{"path":"./faqs/galaxy/workflows_import_from_dockstore.md","range":{"start":{"line":25,"column":19},"end":{"line":25,"column":287}}},"severity":"WARNING","code":{"value":"GTN:002","url":"https://github.com/galaxyproject/training-material/wiki/Error-Codes#gtn002"},"suggestions":[{"text":"","range":{"start":{"line":25,"column":19},"end":{"line":25,"column":287}}}]}
{: .hands_on}
28 changes: 0 additions & 28 deletions faqs/galaxy/workflows_import_from_url.md
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2 changes: 1 addition & 1 deletion topics/assembly/tutorials/vgp_workflow_training/tutorial.md
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Expand Up @@ -225,7 +225,7 @@ All analyses described in this tutorial are performed using *workflows*--chains
>
> {% snippet faqs/galaxy/workflows_import_from_workflowhub.md %}
>
> {% snippet faqs/galaxy/workflows_import_from_url.md %}
> {% snippet faqs/galaxy/workflows_import.md %}
>
{: .details}
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