Add indicspecies tool #149
Open
Conversation
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
bgruening
reviewed
Dec 5, 2024
bgruening
reviewed
Dec 5, 2024
Co-authored-by: Björn Grüning <bjoern@gruenings.eu>
bgruening
reviewed
Dec 6, 2024
| @@ -1,4 +1,4 @@ | |||
| <tool id="indval" name="Indicspecies" version="0.1.0+galaxy0" profile="23.0"> | |||
| <tool id="indval" name="Indicspecies" version="0.1.0+galaxy0" profile="16.04"> | |||
There was a problem hiding this comment.
Why did you decrease it?
There was a problem hiding this comment.
I tested the tool with planemo locally and with different “profile” and the tool only works with 16.04. I couldn't get it to work with 23.0 or 21.05 (automatically set by planemo tool_init) and I don't really understand why. It seems that Galaxy or the docker container can't find the required packages with these “profile”, but maybe I'm mistaken.
There was a problem hiding this comment.
mh, this is strange, can you reproduce this locally? If I find time I will check it out.
|
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
No description provided.