diff --git a/validation/models.yaml b/validation/models.yaml index 19fed8c3..c20ca0b0 100644 --- a/validation/models.yaml +++ b/validation/models.yaml @@ -68,6 +68,17 @@ LiteralSequenceExpression: ga4gh_digest: ECvt22ZFJ6RcLutlH07yAkd2-hNb-dwV ga4gh_serialize: '{"sequence":"ACGT","type":"LiteralSequenceExpression"}' +ReferenceLengthExpression: + - + in: + type: ReferenceLengthExpression + length: 11 + repeatSubunitLength: 3 + out: + ga4gh_identify: null + ga4gh_digest: ir--KEiFgGke1N__iRkSaQdPK4_oxBmc + ga4gh_serialize: '{"length":11,"repeatSubunitLength":3,"sequence":"CTCCTCCTCCT","type":"ReferenceLengthExpression"}' + Allele: - name: "rs7412@GRCh38>T w/LiteralSequenceExpression" in: @@ -86,6 +97,28 @@ Allele: ga4gh_digest: PkeY9RbMt9CEFakQ0AgDdAQ7POUeoWR0 ga4gh_identify: ga4gh:VA.PkeY9RbMt9CEFakQ0AgDdAQ7POUeoWR0 ga4gh_serialize: '{"location":"7gpsYFTLxYPNrBIhA0X4Q5h7vcKFsS8m","state":{"sequence":"T","type":"LiteralSequenceExpression"},"type":"Allele"}' + - name: "NC_000001.11:40819438:CTCCTCCT:CTCCTCCTCCT w/ReferenceLengthExpression" + in: + type: Allele + expressions: + - syntax: spdi + value: NC_000001.11:40819438:CTCCTCCT:CTCCTCCTCCT + location: + type: SequenceLocation + sequenceReference: + refgetAccession: SQ.Ya6Rs7DHhDeg7YaOSg1EoNi3U_nQ9SvO + residueAlphabet: na + id: NC_000001.11 + start: 40819438 + end: 40819446 + state: + type: ReferenceLengthExpression + length: 11 + repeatSubunitLength: 3 + out: + ga4gh_digest: FbiZxPysKpR5m1YI09JJ7S1U6RLpzWHs + ga4gh_identify: 'ga4gh:VA.FbiZxPysKpR5m1YI09JJ7S1U6RLpzWHs' + ga4gh_serialize: '{"location":"Z1UhRc7UvhuJB2fMAC2NJo9UsCfsUoKB","state":{"length":11,"repeatSubunitLength":3,"type":"ReferenceLengthExpression"},"type":"Allele"}' Haplotype: - name: "APOE1 on GRCh38, inline"