NAMESPACE

# Generated by roxygen2: do not edit by hand

export(add_covariate)
export(build_interval_formula)
export(calc_shortest_path)
export(cds)
export(centroids)
export(compare_abundances)
export(compare_ko_to_wt_at_timepoint)
export(estimate_abundances)
export(estimate_abundances_over_interval)
export(get_norm_counts)
export(get_paga_graph)
export(hooke_theme_opts)
export(initial_pcor_graph)
export(model)
export(new_cell_count_model)
export(new_cell_count_set)
export(plot_contrast)
export(pseudobulk_ccs_for_states)
export(select_model)
export(subset_ccs)
exportClasses(cell_count_model)
exportClasses(cell_count_set)
import(PLNmodels)
import(dplyr)
import(ggplot2)
import(tidygraph)
importFrom(PLNmodels,PLNnetwork)
importFrom(PLNmodels,getBestModel)
importFrom(PLNmodels,getModel)
importFrom(PLNmodels,prepare_data)
importFrom(dplyr,"%>%")
importFrom(dplyr,full_join)
importFrom(dplyr,summarize)
importFrom(igraph,graph_from_data_frame)
importFrom(tibble,tibble)