Simplify actions and deploy from "oldrel" version (robust for shinyap…

…ps.io - closes #66)

.github/workflows/document-and-deploy.yml

@@ -0,0 +1,87 @@
+name: document-and-deploy
+
+on:
+  push:
+  pull_request:
+  release:
+
+jobs:
+  document-and-deploy:
+    # Skip deploy for automated (e.g., documentation) and [no-deploy] commits
+    if: "!contains(github.event.head_commit.message, '[automated]') && !contains(github.event.head_commit.message, '[no-deploy]')"
+    runs-on: ubuntu-latest
+
+    steps:
+      - name: Checkout
+        uses: actions/checkout@v4
+
+      - uses: r-lib/actions/setup-pandoc@v2
+
+      - name: Set up R version
+        uses: r-lib/actions/setup-r@v2
+        with:
+          r-version: "oldrel" # As shinyapps.io needs some time to catch up after releases
+          use-public-rspm: true
+
+      - name: Set up R Dependencies
+        uses: r-lib/actions/setup-r-dependencies@v2
+        with:
+          extra-packages: devtools, roxygen2, remotes, rsconnect
+
+      - name: Create documentation
+        run: |
+          R -e "
+            file.remove('NAMESPACE');
+            descr <- readLines('DESCRIPTION');
+            descr <- stringr::str_replace(descr, '^Date.*$', paste('Date:', Sys.Date()));
+            writeLines(descr, 'DESCRIPTION');
+            roxygen2::roxygenise();
+            try(devtools::build_manual())
+          "
+
+      - name: commit
+        run: |
+          git config --local user.email "actions@github.com"
+          git config --local user.name "GitHub Actions"
+          git add -f man/\* NAMESPACE
+          git commit -m 'Documentation' || echo "No changes to commit"
+          git push origin || echo "No changes to commit"
+
+      - name: Deploy to Shiny
+        env:
+          GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+        run: |
+          R -e "
+            remotes::remotes::install_local(force = TRUE);
+            rsconnect::setAccountInfo(name='forrt-replications', token=${{secrets.SHINYAPPS_TOKEN}}, secret=${{secrets.SHINYAPPS_SECRET}});
+            rsconnect::deployApp(appName = 'fred_annotator', appDir = './inst/fred_annotator', forceUpdate = TRUE)";
+            rsconnect::deployApp(appName = 'fred_explorer', appDir = './inst/fred_explorer', forceUpdate = TRUE)";
+          "
+
+      - name: Deploy release version conditionally
+        if: github.event_name == 'release' && github.event.release.tag_name != '*test*'
+        run: |
+          R -e "
+              appDir <- system.file('fred_explorer', package = 'FReD');
+              rsconnect::deployApp(appName = 'fred_explorer_release', appDir = './inst/fred_explorer', forceUpdate = TRUE);
+              appDir <- system.file('fred_annotator', package = 'FReD');
+              rsconnect::deployApp(appName = 'fred_annotator_release', appDir = './inst/fred_annotator', forceUpdate = TRUE);
+          "
+
+      - name: Create pkgdown
+        env:
+          GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+        run: |
+          R -e "
+            if (!require(FReD) remotes::remotes::install_local(force = TRUE);
+            options(pkgdown.internet = TRUE)
+            pkgdown::build_site_github_pages(new_process = FALSE)
+          "
+
+      - name: Deploy to GitHub pages 🚀
+        if: ${{ github.ref_name }} == 'main'
+        uses: JamesIves/github-pages-deploy-action@v4
+        with:
+          clean: true
+          branch: gh-pages
+          folder: docs