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species-specific sequences #22

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wangzhichao1990 opened this issue Aug 9, 2024 · 1 comment
Open

species-specific sequences #22

wangzhichao1990 opened this issue Aug 9, 2024 · 1 comment

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@wangzhichao1990
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Hi,
Is there a way to extract species-specific kmers from the database and assemble them into species-specific sequences as long as possible?
These can then be used to design diagnostic PCR primers.

@Q-chen27
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Q-chen27 commented Aug 9, 2024

This idea is interesting, it can output species-specific kmers, but only for one end. For the other end, the code would need to be customized and modified according to your idea.

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