From e1a7e2d292bcd4b19d542f9854e3fa3cbbe6d5ba Mon Sep 17 00:00:00 2001
From: Stephan Reichl <53785552+sreichl@users.noreply.github.com>
Date: Fri, 7 Apr 2023 17:21:13 +0200
Subject: [PATCH] add CITATION.cff file

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 CITATION.cff | 38 ++++++++++++++++++++++++++++++++++++++
 1 file changed, 38 insertions(+)
 create mode 100644 CITATION.cff

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+# This CITATION.cff file was generated with cffinit.
+# Visit https://bit.ly/cffinit to generate yours today!
+
+cff-version: 1.2.0
+title: >-
+  Genomic Region Set & (Ranked) Gene Set Enrichment Analysis
+  & Visualization Workflow for Human and Mouse Genomes.
+message: >-
+  If you use this software, please cite it using the
+  metadata from this file.
+type: software
+authors:
+  - given-names: Stephan
+    family-names: Reichl
+    orcid: 'https://orcid.org/0000-0001-8555-7198'
+    affiliation: CeMM Research Center for Molecular Medicine
+  - given-names: Christoph
+    family-names: Bock
+    orcid: 'https://orcid.org/0000-0001-6091-3088'
+    affiliation: CeMM Research Center for Molecular Medicine
+repository-code: 'https://github.com/epigen/enrichment_analysis'
+url: 'https://epigen.github.io/enrichment_analysis/'
+abstract: >-
+  Given human (hg19 or hg38) or mouse (mm9 or mm10) based
+  genomic region sets (i.e., region sets) and/or (ranked)
+  gene sets of interest and respective background
+  region/gene sets, the enrichment of terms within the
+  configured databases is determined using LOLA, GREAT,
+  GSEApy (over-representation analysis (ORA) & preranked
+  GSEA), aggregated and visualized.
+keywords:
+  - Bioinformatics
+  - Workflow
+  - Enrichment Analysis
+  - Epigenetics
+  - Visualization
+  - Snakemake
+license: GPL-3.0