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Releases: drivenbyentropy/aptasuite

AptaSuite v0.9.8

04 May 21:01
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* Added option to export telemetry data associated with the experiment
in the export wizard.

AptaSuite v0.9.7c

15 Jul 20:37
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* Fixed an issue causing a crash when running AptaTrace using
primer-less sequences. Closes #102.
* Fixed several issues related to analyzing sequences containing only
the randomized region.
* Added batch mode, allowing the user to import multiplexed, pools
without primers.
* Fixed an issue causing sequences to be rejected when using batch mode
and a randomized region range.

AptaSuite v0.9.7b

15 Jul 18:35
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* Fixed an issue causing a crash when running AptaTrace using
primer-less sequences. Closes #102.
* Fixed several issues related to analyzing sequences containing only
the randomized region.
* Added batch mode, allowing the user to import multiplexed, pools
without primers.

AptaSuite v0.9.7

15 Jul 18:30
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* Fixed an issue causing a crash when running AptaTrace using
primer-less sequences. Closes #102.
* Fixed several issues related to analyzing sequences containing only
the randomized region.
* Added batch mode, allowing the user to import multiplexed, pools
without primers.

AptaSuite v0.9.6b

09 Jul 19:44
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* Fixed an issue causing a crash when running AptaTrace using
primer-less sequences. Closes #102.

v0.9.5b: AptaSuite v0.9.5

21 Sep 22:31
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* Updated several depencencies with known vunerabilities to higher,
secure, versions
* Fixed a small bug where exporting undetermined sequences during
parsing in compressed format would not have a "gz" suffix. Closes #73.
* Updated build to compile with openJDK14 and Java 11. Closes #93.

AptaSuite v0.9.4

05 Nov 23:45
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* Fixes issue where MapDB closes connections prematurely when the thread
it is running in gets interrupted. Fixes #62.

* Fixes an issue where under certain conditions, the experiment path is
erroneously identified. Is happens most commonly when copying and
experiment across different platforms. Closes #65.

* Cluster cardinalities are now stored in the LazyCache. Closes #63.

AptaSuite v0.9.3

15 Oct 23:10
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Added Lazy Loading to the Aptamer Family Analysis. Multiple, long
computations are now only calculated once and stored on disk. If the
user selects a corresponding UI element which has previously been
computed, the results are loaded from disk. This should significantly
enhance the user experience on larger datasets. Closes #55.

AptaSuite v0.9.2

09 Oct 15:18
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* Fixed a bug leading to AptaSuite crashing on Windows machines during
the structure prediction process when using the GUI. Closes #49.

AptaSuite v0.9.1b

14 Sep 18:16
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* Fixed a bug in the New Experiment Wizard where changing either "Store
Reverse Complement" or "Only Randomized Region in Data" would modify the
others value.
* Added the ability to write undetermined reads (i.e. those which fail
to be processed by the parser) to file. Closes #59.
* Added the ability to import files containing only the randomized
region if the data has previously been demultiplexed. Closes #53.
* Added the ability to parse the reverse complement of the contig should
aptamers be present in forward and reverse direction in the data. Closes
#54.
* Fixed a GUI issue in the New Experiment Wizard where the read
statistics were not correctly displayed after parsing has been completed
* Added official logo to the application window
* Added documentation for the above features.