Releases: drivenbyentropy/aptasuite
Releases · drivenbyentropy/aptasuite
AptaSuite v0.9.8
* Added option to export telemetry data associated with the experiment in the export wizard.
AptaSuite v0.9.7c
* Fixed an issue causing a crash when running AptaTrace using primer-less sequences. Closes #102. * Fixed several issues related to analyzing sequences containing only the randomized region. * Added batch mode, allowing the user to import multiplexed, pools without primers. * Fixed an issue causing sequences to be rejected when using batch mode and a randomized region range.
AptaSuite v0.9.7b
* Fixed an issue causing a crash when running AptaTrace using primer-less sequences. Closes #102. * Fixed several issues related to analyzing sequences containing only the randomized region. * Added batch mode, allowing the user to import multiplexed, pools without primers.
AptaSuite v0.9.7
* Fixed an issue causing a crash when running AptaTrace using primer-less sequences. Closes #102. * Fixed several issues related to analyzing sequences containing only the randomized region. * Added batch mode, allowing the user to import multiplexed, pools without primers.
AptaSuite v0.9.6b
* Fixed an issue causing a crash when running AptaTrace using primer-less sequences. Closes #102.
v0.9.5b: AptaSuite v0.9.5
* Updated several depencencies with known vunerabilities to higher, secure, versions * Fixed a small bug where exporting undetermined sequences during parsing in compressed format would not have a "gz" suffix. Closes #73. * Updated build to compile with openJDK14 and Java 11. Closes #93.
AptaSuite v0.9.4
* Fixes issue where MapDB closes connections prematurely when the thread it is running in gets interrupted. Fixes #62. * Fixes an issue where under certain conditions, the experiment path is erroneously identified. Is happens most commonly when copying and experiment across different platforms. Closes #65. * Cluster cardinalities are now stored in the LazyCache. Closes #63.
AptaSuite v0.9.3
Added Lazy Loading to the Aptamer Family Analysis. Multiple, long computations are now only calculated once and stored on disk. If the user selects a corresponding UI element which has previously been computed, the results are loaded from disk. This should significantly enhance the user experience on larger datasets. Closes #55.
AptaSuite v0.9.2
* Fixed a bug leading to AptaSuite crashing on Windows machines during the structure prediction process when using the GUI. Closes #49.
AptaSuite v0.9.1b
* Fixed a bug in the New Experiment Wizard where changing either "Store Reverse Complement" or "Only Randomized Region in Data" would modify the others value. * Added the ability to write undetermined reads (i.e. those which fail to be processed by the parser) to file. Closes #59. * Added the ability to import files containing only the randomized region if the data has previously been demultiplexed. Closes #53. * Added the ability to parse the reverse complement of the contig should aptamers be present in forward and reverse direction in the data. Closes #54. * Fixed a GUI issue in the New Experiment Wizard where the read statistics were not correctly displayed after parsing has been completed * Added official logo to the application window * Added documentation for the above features.