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some dependencies missing in requirements.yml #4

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LidiaML opened this issue May 29, 2024 · 0 comments
Open

some dependencies missing in requirements.yml #4

LidiaML opened this issue May 29, 2024 · 0 comments

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@LidiaML
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LidiaML commented May 29, 2024

Dear developers, thank your for sharing your work, you did an amazing job.

I had some issues during the setup of the conda environment because of some conflicts between the R version installed within conda environment and another installation that I already had (basically the problem is caused by rpy2 and I could solve it setting the right LD_LIBRARY_PATH in the environment variables, etc...)

Then I had to install some missing dependencies (TxDb.Mmusculus.UCSC.mm10.knownGene, genomeinfodb; genomeinfodbdata; chipseeker). It would be great if they were already specified in the requirements file.

Thanks!

Lídia

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