DESCRIPTION

Package: ARCOS
Type: Package
Title: Automatic Recognition of Collective Signalling
Version: 0.3.0
Authors@R: c(person(given = "Maciej", family = "Dobrzyński", role = c("aut", "cre"), email = "sci@macdobry.net"),
          person("Daniel", "Wollschlaeger", role="ctb"))
Maintainer@R: c(person(given = "Maciej", family = "Dobrzyński", role = c("aut", "cre"), email = "sci@macdobry.net"))
Description: The ARCOS package implements the algorithm for identification and tracking of spatially clustered objects in time series data. 
            It works with 1-, 2-, and 3D geometries. The algorithm tackles the problem of identification of protein activation in 2- and 3D 
            cell cultures that occur collectively in neighbouring cells over time. Despite its focus on cell signalling, the algorithm can be 
            also applied to other spatially correlated phenomena that occur over time.
License: MIT + file LICENSE
URL: https://github.com/dmattek/ARCOS
Encoding: UTF-8
LazyData: true
Suggests: 
    testthat (>= 3.0.0),
    knitr,
    rmarkdown,
    ggthemes,
    ggnewscale,
    shiny,
    plotly
Config/testthat/edition: 3
LinkingTo: Rcpp
Imports: 
    data.table (>= 1.9.8),
    Rcpp,
    RANN,
    ape,
    dbscan,
    imputeTS,
    OpenImageR,
    ggplot2,
    grDevices,
    sp,
    elsa
RoxygenNote: 7.2.3
VignetteBuilder: knitr