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explaining the "hack" - aka messy triangulation update #4

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sergpolly opened this issue Jan 10, 2019 · 0 comments
Open

explaining the "hack" - aka messy triangulation update #4

sergpolly opened this issue Jan 10, 2019 · 0 comments

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@sergpolly
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pushed triangulation hack 5fc0cf0 should be ok since "new" triangulation does not require minnumchr for karyotyping anymore

new requires maxnumchr only:

nchr: known number of chromosomes or maximal number of chromosomes (for estimation)

old required (min,max):

nchr: known number of chromosomes or (min,max) number of chromosomes (for estimation)

that was causing frustration here:

res=triangulation.predict_karyotype(d,nchr=nchr,pred_nchr=pred_nchr,transform=transform,shuffle=True,seed=seed,rand_frac=rand_frac,rand_n=rand_n)

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