pyproject.toml

[tool.poetry]
name = "granite-suite"
version = "0.3.0"
description = "granite is a collection of software to call, filter and work with genomic variants."
authors = ["Michele Berselli <berselli.michele@gmail.com>", "Phil Grayson"]
readme = "README.md"
license = "MIT"
repository = "https://github.com/dbmi-bgm/granite"
homepage = "https://github.com/dbmi-bgm/granite"
classifiers = [
    'License :: OSI Approved :: MIT License',
    'Operating System :: POSIX :: Linux',
    'Programming Language :: Python',
    'Programming Language :: Python :: 3'
]
packages = [
    { include="granite" }
]


[tool.poetry.dependencies]
python = "^3.9"
bitarray = "^2.9.2"
h5py = "^3.11.0"
numpy = "^1.26.4"
matplotlib = "^3.9.0"
pysam = "^0.22.1"
pytabix = "^0.1"


[tool.poetry.dev-dependencies]
pytest = "*"


[tool.poetry.scripts]
granite = "granite.granite:main"


[build-system]
requires = ["poetry_core>=1.0.0"]
build-backend = "poetry.core.masonry.api"