FIX

Github Action
davidycliao · Oct 4, 2023 · 2f5ebac · 2f5ebac
1 parent 48878ea
commit 2f5ebac
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diff --git a/.github/workflows/r.yml b/.github/workflows/r.yml
@@ -5,68 +5,118 @@
 #
 # See https://github.com/r-lib/actions/tree/master/examples#readme for
 # additional example workflows available for the R community.
+# on:
+#   push:
+#     branches: [main, master]
+#   pull_request:
+#     branches: [main, master]
+#
+# name: R-CMD-check
+#
+# jobs:
+#   R-CMD-check:
+#     runs-on: ${{ matrix.config.os }}
+#
+#     name: ${{ matrix.config.os }} (${{ matrix.config.r }})
+#
+#     strategy:
+#       fail-fast: false
+#       matrix:
+#         config:
+#           - {os: macos-latest,   r: 'release'}
+#           - {os: windows-latest, r: 'release'}
+#           - {os: ubuntu-latest,   r: 'devel', http-user-agent: 'release'}
+#           - {os: ubuntu-latest,   r: 'release'}
+#     env:
+#       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+#       R_KEEP_PKG_SOURCE: yes
+#
+#     steps:
+#       - uses: actions/checkout@v2
+#
+#       - uses: r-lib/actions/setup-pandoc@v2
+#
+#
+#       - name: Setup Python (Only on ubuntu-latest)
+#         if: matrix.config.os == 'ubuntu-latest'
+#         uses: actions/setup-python@v2
+#         with:
+#           python-version: '3.x'
+#
+#       - name: Install Python venv and dependencies (Only on ubuntu-latest)
+#         if: matrix.config.os == 'ubuntu-latest'
+#         run: |
+#           sudo apt-get update
+#           sudo apt-get install -y python3-venv
+#           python -m venv ~/.venv
+#           echo "RETICULATE_PYTHON=~/.venv/bin/python" >> $GITHUB_ENV
+#           source ~/.venv/bin/activate
+#       - uses: r-lib/actions/setup-r@v2
+#         with:
+#           r-version: ${{ matrix.config.r }}
+#           http-user-agent: ${{ matrix.config.http-user-agent }}
+#           use-public-rspm: true
+#
+#       - name: Install reticulate (Only on ubuntu-latest)
+#         if: matrix.config.os == 'ubuntu-latest'
+#         run: |
+#           Rscript -e "install.packages('reticulate', repos = 'https://cloud.r-project.org/')"
+#       - uses: r-lib/actions/setup-r-dependencies@v2
+#         with:
+#           extra-packages: any::rcmdcheck
+#           needs: check
+#
+#       - uses: r-lib/actions/check-r-package@v2
+#         with:
+#           upload-snapshots: true
+#
+
+
 on:
   push:
-    branches: [main, master]
+    branches:
+      - main
   pull_request:
-    branches: [main, master]
+    branches:
+      - main
 
 name: R-CMD-check
 
 jobs:
   R-CMD-check:
     runs-on: ${{ matrix.config.os }}
-
-    name: ${{ matrix.config.os }} (${{ matrix.config.r }})
-
     strategy:
       fail-fast: false
       matrix:
         config:
-          - {os: macos-latest,   r: 'release'}
+          - {os: macOS-latest, r: 'release'}
           - {os: windows-latest, r: 'release'}
-          - {os: ubuntu-latest,   r: 'devel', http-user-agent: 'release'}
-          - {os: ubuntu-latest,   r: 'release'}
-    env:
-      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
-      R_KEEP_PKG_SOURCE: yes
+          - {os: ubuntu-20.04, r: 'release'}
+          - {os: ubuntu-20.04, r: 'devel'}
+
+    name: ${{ matrix.config.os }} (${{ matrix.config.r }})
 
     steps:
       - uses: actions/checkout@v2
 
-      - uses: r-lib/actions/setup-pandoc@v2
-
-
-      - name: Setup Python (Only on ubuntu-latest)
-        if: matrix.config.os == 'ubuntu-latest'
-        uses: actions/setup-python@v2
-        with:
-          python-version: '3.x'
-
-      - name: Install Python venv and dependencies (Only on ubuntu-latest)
-        if: matrix.config.os == 'ubuntu-latest'
-        run: |
-          sudo apt-get update
-          sudo apt-get install -y python3-venv
-          python -m venv ~/.venv
-          echo "RETICULATE_PYTHON=~/.venv/bin/python" >> $GITHUB_ENV
-          source ~/.venv/bin/activate
       - uses: r-lib/actions/setup-r@v2
         with:
           r-version: ${{ matrix.config.r }}
-          http-user-agent: ${{ matrix.config.http-user-agent }}
-          use-public-rspm: true
 
-      - name: Install reticulate (Only on ubuntu-latest)
-        if: matrix.config.os == 'ubuntu-latest'
+      - uses: r-lib/actions/setup-pandoc@v2
+
+      - name: Install system dependencies
+        if: runner.os == 'Linux'
         run: |
-          Rscript -e "install.packages('reticulate', repos = 'https://cloud.r-project.org/')"
-      - uses: r-lib/actions/setup-r-dependencies@v2
-        with:
-          extra-packages: any::rcmdcheck
-          needs: check
+          sudo apt-get update
+          sudo apt-get install -y python3-venv libpython3-dev
 
-      - uses: r-lib/actions/check-r-package@v2
-        with:
-          upload-snapshots: true
+      - name: Install R dependencies
+        run: |
+          install.packages("remotes")
+          remotes::install_deps(dependencies = TRUE)
+          remotes::install_cran("rcmdcheck")
 
+      - name: Check package
+        run: rcmdcheck::rcmdcheck(args = "--no-manual", error_on = "error")
+        shell: Rscript {0}
diff --git a/.github/workflows/r2.yml b/.github/workflows/r2.yml
@@ -6,41 +6,41 @@
 # See https://github.com/r-lib/actions/tree/master/examples#readme for
 # additional example workflows available for the R community.
 
-name: R
-
-on:
-  push:
-    branches: [ "main" ]
-  pull_request:
-    branches: [ "main" ]
-
-permissions:
-  contents: read
-
-jobs:
-  build:
-    runs-on: macos-latest
-    strategy:
-      matrix:
-        r-version: ['4.0.0', '4.1.0', '4.1.1']
-    steps:
-      - uses: actions/checkout@v3
-      
-      - name: Install pandoc
-        run: |
-          brew install pandoc
-          
-      - name: Set up R ${{ matrix.r-version }}
-        uses: r-lib/actions/setup-r@v1
-        with:
-          r-version: ${{ matrix.r-version }}
-          
-      - name: Install dependencies
-        run: |
-          install.packages(c("remotes", "rcmdcheck"))
-          remotes::install_deps(dependencies = TRUE)
-        shell: Rscript {0}
-        
-      - name: Check
-        run: rcmdcheck::rcmdcheck(args = "--no-manual", error_on = "error")
-        shell: Rscript {0}
+# name: R
+#
+# on:
+#   push:
+#     branches: [ "main" ]
+#   pull_request:
+#     branches: [ "main" ]
+#
+# permissions:
+#   contents: read
+#
+# jobs:
+#   build:
+#     runs-on: macos-latest
+#     strategy:
+#       matrix:
+#         r-version: ['4.0.0', '4.1.0', '4.1.1']
+#     steps:
+#       - uses: actions/checkout@v3
+#
+#       - name: Install pandoc
+#         run: |
+#           brew install pandoc
+#
+#       - name: Set up R ${{ matrix.r-version }}
+#         uses: r-lib/actions/setup-r@v1
+#         with:
+#           r-version: ${{ matrix.r-version }}
+#
+#       - name: Install dependencies
+#         run: |
+#           install.packages(c("remotes", "rcmdcheck"))
+#           remotes::install_deps(dependencies = TRUE)
+#         shell: Rscript {0}
+#
+#       - name: Check
+#         run: rcmdcheck::rcmdcheck(args = "--no-manual", error_on = "error")
+#         shell: Rscript {0}