From b36cfe5103cb4aa48f8122d593dc548a6fb186e8 Mon Sep 17 00:00:00 2001 From: Daniel Purtov <93288603+danielptv@users.noreply.github.com> Date: Tue, 3 Dec 2024 10:04:36 +0100 Subject: [PATCH] chore: Test with Python 3.13, drop support for Python 3.8 (#224) * chore: Test with Python 3.13, drop support for Python 3.8 * ci: Use ruff as formatter * fix: ruff errors * fix: yield instead of return * [pre-commit.ci] auto fixes from pre-commit.ci hooks for more information, see https://pre-commit.ci --------- Co-authored-by: Daniel Purtov Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com> --- .github/workflows/test.yml | 2 +- .vscode/extensions.json | 5 +- .vscode/settings.json | 4 +- output/.gitignore | 4 - poetry.lock | 1214 +++++++++++++++++++----------------- pyproject.toml | 30 +- tap_db2/connector.py | 10 +- tap_db2/stream.py | 78 ++- tox.ini | 9 +- 9 files changed, 732 insertions(+), 624 deletions(-) delete mode 100644 output/.gitignore diff --git a/.github/workflows/test.yml b/.github/workflows/test.yml index 5c45632..f8f0a19 100644 --- a/.github/workflows/test.yml +++ b/.github/workflows/test.yml @@ -7,7 +7,7 @@ jobs: runs-on: ubuntu-latest strategy: matrix: - python-version: ["3.8", "3.9", "3.10", "3.11", "3.12"] + python-version: ["3.9", "3.10", "3.11", "3.12", "3.13"] steps: - name: Checkout uses: actions/checkout@v4 diff --git a/.vscode/extensions.json b/.vscode/extensions.json index b953b2b..3102f43 100644 --- a/.vscode/extensions.json +++ b/.vscode/extensions.json @@ -1,8 +1,7 @@ { "recommendations": [ "ms-python.python", - "ms-python.pylint", - "ms-python.flake8", - "ms-python.black-formatter" + "charliermarsh.ruff", + "ms-python.mypy-type-checker" ] } diff --git a/.vscode/settings.json b/.vscode/settings.json index 75d84e6..0bbd73b 100644 --- a/.vscode/settings.json +++ b/.vscode/settings.json @@ -1,3 +1,5 @@ { - "editor.defaultFormatter": "ms-python.black-formatter" + "[python]": { + "editor.defaultFormatter": "charliermarsh.ruff" + } } diff --git a/output/.gitignore b/output/.gitignore deleted file mode 100644 index 80ff9d2..0000000 --- a/output/.gitignore +++ /dev/null @@ -1,4 +0,0 @@ -# This directory is used as a target by target-jsonl, so ignore all files - -* -!.gitignore diff --git a/poetry.lock b/poetry.lock index 5b67d57..e209f09 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,4 +1,4 @@ -# This file is automatically @generated by Poetry 1.8.3 and should not be changed by hand. +# This file is automatically @generated by Poetry 1.7.1 and should not be changed by hand. [[package]] name = "appdirs" @@ -13,22 +13,22 @@ files = [ [[package]] name = "attrs" -version = "23.2.0" +version = "24.2.0" description = "Classes Without Boilerplate" optional = false python-versions = ">=3.7" files = [ - {file = "attrs-23.2.0-py3-none-any.whl", hash = "sha256:99b87a485a5820b23b879f04c2305b44b951b502fd64be915879d77a7e8fc6f1"}, - {file = "attrs-23.2.0.tar.gz", hash = "sha256:935dc3b529c262f6cf76e50877d35a4bd3c1de194fd41f47a2b7ae8f19971f30"}, + {file = "attrs-24.2.0-py3-none-any.whl", hash = "sha256:81921eb96de3191c8258c199618104dd27ac608d9366f5e35d011eae1867ede2"}, + {file = "attrs-24.2.0.tar.gz", hash = "sha256:5cfb1b9148b5b086569baec03f20d7b6bf3bcacc9a42bebf87ffaaca362f6346"}, ] [package.extras] -cov = ["attrs[tests]", "coverage[toml] (>=5.3)"] -dev = ["attrs[tests]", "pre-commit"] -docs = ["furo", "myst-parser", "sphinx", "sphinx-notfound-page", "sphinxcontrib-towncrier", "towncrier", "zope-interface"] -tests = ["attrs[tests-no-zope]", "zope-interface"] 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CPython", ] packages = [ @@ -30,7 +31,7 @@ packages = [ ] [tool.poetry.dependencies] -python = ">=3.8,<4" +python = ">=3.9" singer-sdk = "0.42.1" ibm-db-sa = "0.4.1" sqlalchemy = "2.0.36" @@ -61,18 +62,25 @@ vcs = "git" style = "semver" [tool.ruff] -target-version = "py38" +target-version = "py39" [tool.ruff.lint] select = [ - "F", # Pyflakes - "W", # pycodestyle warnings - "E", # pycodestyle errors - "I", # isort - "N", # pep8-naming - "D", # pydocsyle - "ICN", # flake8-import-conventions - "RUF", # ruff + "F", # Pyflakes + "W", # pycodestyle warnings + "E", # pycodestyle errors + "FA", # flake8-future-annotations + "I", # isort + "N", # pep8-naming + "D", # pydocsyle + "UP", # pyupgrade + "ICN", # flake8-import-conventions + "RET", # flake8-return + "SIM", # flake8-simplify + "TCH", # flake8-type-checking + "PL", # Pylint + "PERF", # Perflint + "RUF", # ruff ] [tool.ruff.lint.flake8-import-conventions] diff --git a/tap_db2/connector.py b/tap_db2/connector.py index aaa836f..309a2f3 100644 --- a/tap_db2/connector.py +++ b/tap_db2/connector.py @@ -8,8 +8,10 @@ import sqlalchemy as sa from singer_sdk import SQLConnector from singer_sdk import typing as th -from sqlalchemy.engine import Engine -from sqlalchemy.types import TypeEngine + +if t.TYPE_CHECKING: + from sqlalchemy.engine import Engine + from sqlalchemy.types import TypeEngine SUPPLIED_USER_TABLES_PATTERN = r"^(DSN_|PLAN_TABLE)" @@ -105,9 +107,7 @@ def discover_catalog_entries(self) -> list[dict]: # Filter by schema # Connection parameter 'CURRENTSCHEMA=mySchema;' doesn't work # https://www.ibm.com/support/pages/525-error-nullidsysstat-package-when-trying-set-current-schema-against-db2-zos-database - target_schema = ( - self.config["schema"] if "schema" in self.config else None - ) + target_schema = self.config.get("schema", None) if ( target_schema is None or target_schema.strip().lower() == schema_name.strip().lower() diff --git a/tap_db2/stream.py b/tap_db2/stream.py index 3fdd91f..0365ead 100644 --- a/tap_db2/stream.py +++ b/tap_db2/stream.py @@ -9,10 +9,12 @@ import sqlalchemy as sa from singer_sdk import SQLStream from singer_sdk.helpers._state import STARTING_MARKER -from singer_sdk.helpers.types import Context from tap_db2.connector import DB2Connector +if t.TYPE_CHECKING: + from singer_sdk.helpers.types import Context + class DB2Stream(SQLStream): """Stream class for IBM DB2 streams.""" @@ -84,11 +86,7 @@ def get_records(self, context: Context | None) -> t.Iterable[dict[str, t.Any]]: if self.ABORT_AT_RECORD_COUNT is not None: query = query.limit(self.ABORT_AT_RECORD_COUNT + 1) - filter_configs = self.config.get("filter", {}) - if self.tap_stream_id in filter_configs: - query = query.where(sa.text(filter_configs[self.tap_stream_id]["where"])) - elif "*" in filter_configs: - query = query.where(sa.text(filter_configs["*"]["where"])) + query = self._apply_filter_config(query) with self.connector._connect() as conn: if partition_key is None: @@ -100,35 +98,9 @@ def get_records(self, context: Context | None) -> t.Iterable[dict[str, t.Any]]: yield transformed_record else: - lower_limit = None + yield from self._get_partitioned_records(query, table, conn) - termination_query = sa.select( - sa.func.count(table.columns[partition_key]) - ) - if query.whereclause is not None: - termination_query = termination_query.where(query.whereclause) - termination_query_result = conn.execute(termination_query).first() - assert termination_query_result is not None, "Invalid termination query" - termination_limit = int(str(termination_query_result[0])) - fetched_count = 0 - - while fetched_count < termination_limit: - limited_query = query.limit(partition_size) - if lower_limit is not None: - limited_query = limited_query.where( - table.columns[partition_key] > lower_limit - ) - for record in conn.execute(limited_query): - transformed_record = self.post_process(dict(record._mapping)) - - if transformed_record is None: - # Record filtered out during post_process() - continue - lower_limit = transformed_record[partition_key] - fetched_count += 1 - yield transformed_record - - def _get_partition_config(self) -> t.Tuple[t.Optional[str], t.Optional[int]]: + def _get_partition_config(self) -> tuple[str | None, int | None]: partitioning_configs = self.config.get("query_partition", {}) partition_config = partitioning_configs.get( self.tap_stream_id @@ -142,6 +114,44 @@ def _get_partition_config(self) -> t.Tuple[t.Optional[str], t.Optional[int]]: return partition_key, partition_size + def _apply_filter_config(self, query: sa.sql.select) -> sa.sql.select: + filter_configs = self.config.get("filter", {}) + if self.tap_stream_id in filter_configs: + query = query.where(sa.text(filter_configs[self.tap_stream_id]["where"])) + elif "*" in filter_configs: + query = query.where(sa.text(filter_configs["*"]["where"])) + return query + + def _get_partitioned_records( + self, query: sa.sql.select, table: sa.Table, conn: sa.engine.Connection + ) -> t.Iterable[dict[str, t.Any]]: + partition_key, partition_size = self._get_partition_config() + lower_limit = None + + termination_query = sa.select(sa.func.count(table.columns[partition_key])) + if query.whereclause is not None: + termination_query = termination_query.where(query.whereclause) + termination_query_result = conn.execute(termination_query).first() + assert termination_query_result is not None, "Invalid termination query" + termination_limit = int(str(termination_query_result[0])) + fetched_count = 0 + + while fetched_count < termination_limit: + limited_query = query.limit(partition_size) + if lower_limit is not None: + limited_query = limited_query.where( + table.columns[partition_key] > lower_limit + ) + for record in conn.execute(limited_query): + transformed_record = self.post_process(dict(record._mapping)) + + if transformed_record is None: + # Record filtered out during post_process() + continue + lower_limit = transformed_record[partition_key] + fetched_count += 1 + yield transformed_record + @property def is_sorted(self) -> bool: """Expect stream to be sorted. diff --git a/tox.ini b/tox.ini index 37126c7..fa49e19 100644 --- a/tox.ini +++ b/tox.ini @@ -1,9 +1,12 @@ # This file can be used to customize tox tests as well as other test frameworks like flake8 and mypy [tox] -envlist = py38 -; envlist = py38, py39, py310, py311, py312 +envlist = + 3.{9,10,11,12,13} + format + lint isolated_build = true +min_version = 4 [testenv] allowlist_externals = poetry @@ -11,7 +14,7 @@ allowlist_externals = poetry [testenv:pytest] # Run the python tests. # To execute, run `tox -e pytest` -envlist = py38, py39, py310, py311, py312 +envlist = 3.{9,10,11,12,13} commands = poetry install -v poetry run pytest