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temp: snakemake linting disabled
Format and Linting #24: Commit a73af15 pushed by danilotat
December 18, 2024 08:00 26s main
December 18, 2024 08:00 26s
fix: index of STAR with uncompressed genome
Format and Linting #23: Commit 84eb78f pushed by danilotat
December 18, 2024 07:55 1m 18s main
December 18, 2024 07:55 1m 18s
fix: checkpoint for strelka2
Format and Linting #22: Commit bc68122 pushed by danilotat
December 10, 2024 14:12 1m 12s main
December 10, 2024 14:12 1m 12s
enh: restructured config to last edits
Format and Linting #21: Commit 9098fbf pushed by danilotat
November 28, 2024 12:49 1m 18s main
November 28, 2024 12:49 1m 18s
fix: decompressed genome to conf
Format and Linting #20: Commit 207601b pushed by danilotat
November 28, 2024 09:57 1m 9s main
November 28, 2024 09:57 1m 9s
feat: moved into docker containers from conda
Format and Linting #19: Commit 7f565bc pushed by danilotat
November 28, 2024 08:46 1m 13s main
November 28, 2024 08:46 1m 13s
err: removal of CI testing
Format and Linting #18: Commit cf236c4 pushed by danilotat
November 24, 2024 17:03 1m 56s main
November 24, 2024 17:03 1m 56s
enh: allele frequency with bcftools
Format and Linting #17: Commit 37ca903 pushed by danilotat
November 24, 2024 16:36 2m 41s main
November 24, 2024 16:36 2m 41s
Merge branch 'UCL' into main
Format and Linting #16: Commit a513613 pushed by danilotat
November 22, 2024 22:27 1m 58s main
November 22, 2024 22:27 1m 58s
fix: snakemake version lower than 8.0.0
Format and Linting #15: Commit ced0f60 pushed by danilotat
November 11, 2024 09:38 20s main
November 11, 2024 09:38 20s
Merge pull request #3 from ctglab/UCL
Format and Linting #14: Commit a88e175 pushed by danilotat
November 5, 2024 17:46 1m 4s main
November 5, 2024 17:46 1m 4s
Merging latest edits for the setup
Format and Linting #13: Pull request #3 opened by danilotat
November 5, 2024 17:46 1m 1s UCL
UCL
November 5, 2024 17:46 1m 1s
Merge pull request #2 from ctglab/UCL
Format and Linting #12: Commit b1483ff pushed by danilotat
October 25, 2024 12:57 1m 10s main
October 25, 2024 12:57 1m 10s
This PR introduces the gencode notation
Format and Linting #11: Pull request #2 opened by danilotat
October 25, 2024 12:57 1m 5s UCL
UCL
October 25, 2024 12:57 1m 5s
Create README.md
Format and Linting #10: Commit 25e7d29 pushed by danilotat
September 12, 2024 10:34 1m 12s main
September 12, 2024 10:34 1m 12s
Back to conventional conda for CI
Format and Linting #9: Commit 256d2ca pushed by danilotat
September 12, 2024 10:04 1m 16s main
September 12, 2024 10:04 1m 16s
CI using official Snakemake action
Format and Linting #8: Commit bd55682 pushed by danilotat
September 12, 2024 09:06 1m 9s main
September 12, 2024 09:06 1m 9s
Merge branch 'setup'
Format and Linting #7: Commit 5a48b46 pushed by danilotat
September 12, 2024 07:43 1m 13s main
September 12, 2024 07:43 1m 13s
More comprehensive example data
Format and Linting #6: Commit 3f33407 pushed by danilotat
September 3, 2024 09:43 1m 30s main
September 3, 2024 09:43 1m 30s
Bedtools added to the env file
Format and Linting #5: Commit 8815c18 pushed by danilotat
September 3, 2024 07:06 1m 29s main
September 3, 2024 07:06 1m 29s
Subsampled chr6 from aligned file
Format and Linting #4: Commit 869d066 pushed by danilotat
August 27, 2024 09:33 1m 34s main
August 27, 2024 09:33 1m 34s
GIAB intervals
Format and Linting #3: Commit 487f166 pushed by danilotat
August 18, 2024 14:51 1m 7s main
August 18, 2024 14:51 1m 7s
Target exons BED
Format and Linting #2: Commit 087b7be pushed by danilotat
August 18, 2024 14:42 1m 6s main
August 18, 2024 14:42 1m 6s
First commit!
Format and Linting #1: Commit 3657422 pushed by danilotat
August 12, 2024 14:30 1m 21s main
August 12, 2024 14:30 1m 21s