DESCRIPTION

Package: IDBacApp
Type: Package
Title: MALDI-TOF MS Protien and Small Molecule Analysis 
Version: 2.0.0
Author: Chase Clark
Maintainer: Chase Clark <cclark42@uic.edu>
Description: This app allows users to take raw data MALDI-TOF MS files 
    and create bundled mzXML files for easy sharing/database creation as well as data analysis 
    (hierarchical clustering, PCA, Spectra Comparison, Metabolite Association Network).
License: GPL-3
Encoding: UTF-8
LazyData: true
biocViews:
Imports:
    ape (>= 5.3),
    colourpicker (>= 1.0),
    coop (>= 0.6-2),
    data.table (>= 1.12.2),
    DBI (>= 1.0.0),
    digest (>= 0.6.20),
    fst (>= 0.9.0),
    ggplot2 (>= 3.2.0),
    glue (>= 1.3.1),
    graphics,
    grDevices,
    httr (>= 1.4.1),
    igraph (>= 1.2.4.1),
    irlba (>= 2.3.3),
    jsonlite (>= 1.6),
    magrittr (>= 1.5),
    MALDIquant (>= 1.19.3),
    MALDIquantForeign (>= 0.12),
    mzR,
    networkD3 (>= 0.4),
    plotly (>= 4.9.0),
    pool (>= 0.1.4.2),
    remotes,
    reshape2 (>= 1.4.3),
    rhandsontable (>= 0.3.7),
    rmarkdown (>= 1.14),
    RSQLite (>= 2.1.2),
    Rtsne (>= 0.15),
    S4Vectors,
    shinycssloaders (>= 0.2.0),
    sigmajs (>= 0.1.3),
    stats,
    svglite (>= 1.2.2),
    utils,
    Matrix,
    dendextend (>= 1.12.0),
    shiny (>= 1.3.2),
    curl
Suggests:
    knitr (>= 1.23),
    testthat (>= 2.2.1)
RoxygenNote: 7.1.0
VignetteBuilder: knitr
Roxygen: list(markdown = TRUE)