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DESCRIPTION
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Package: dycone
Title: dycone - analyze the dynamic landscape of metabolome data
Version: 1.4.2
Authors@R: person("Christian", "Diener", , "work@cdiener.com", role = c("aut", "cre"))
Description: Dycone ("dynamic cone") allows you infer enzymatic regulation from
metabolome measurements. It employs formalisms based on flux and k-cone analysis
to connect metabolome data to distinct regulations of enzyme activity. Most of
the analysis methods can be applied to genome-scale data.
URL: https://github.com/cdiener/dycone
BugReports: https://github.com/cdiener/dycone/issues
Encoding: UTF-8
License: MIT + file LICENSE
LazyData: true
Depends:
R (>= 3.2)
Imports:
deSolve,
rcdd,
MASS,
pheatmap,
magrittr,
RCurl,
xml2,
quadprog,
limma,
Rcpp,
Matrix
Suggests:
testthat,
covr,
igraph,
knitr,
foreach,
doParallel,
biocViews: Metabolomics, Systems Biology, Pathways, Bayesian,
Multiple Comparison
VignetteBuilder: knitr
RoxygenNote: 6.1.0
LinkingTo: Rcpp