Update 36 packages

[carpentries-bot]

🤖 This is an automated build

This will update the following package versions in your lesson:

# CRAN ===============================
- Matrix       [repo: RSPM -> CRAN; ver: 1.5-1 -> 1.5-3]
- bit          [repo: RSPM -> CRAN; ver: 4.0.4 -> 4.0.5]
- broom        [repo: RSPM -> CRAN; ver: 1.0.1 -> 1.0.2]
- bslib        [repo: RSPM -> CRAN; ver: 0.4.0 -> 0.4.2]
- callr        [repo: RSPM -> CRAN; ver: 3.7.2 -> 3.7.3]
- cli          [repo: RSPM -> CRAN; ver: 3.4.1 -> 3.5.0]
- cpp11        [repo: RSPM -> CRAN; ver: 0.4.2 -> 0.4.3]
- curl         [repo: RSPM -> CRAN; ver: 4.3.2 -> 4.3.3]
- data.table   [repo: RSPM -> CRAN; ver: 1.14.2 -> 1.14.6]
- digest       [repo: RSPM -> CRAN; ver: 0.6.29 -> 0.6.31]
- evaluate     [repo: RSPM -> CRAN; ver: 0.16 -> 0.19]
- ggplot2      [repo: RSPM -> CRAN; ver: 3.3.6 -> 3.4.0]
- highr        [repo: RSPM -> CRAN; ver: 0.9 -> 0.10]
- htmltools    [repo: RSPM -> CRAN; ver: 0.5.3 -> 0.5.4]
- isoband      [repo: RSPM -> CRAN; ver: 0.2.5 -> 0.2.7]
- jsonlite     [repo: RSPM -> CRAN; ver: 1.8.2 -> 1.8.4]
- knitr        [repo: RSPM -> CRAN; ver: 1.40 -> 1.41]
- lifecycle    [repo: RSPM -> CRAN; ver: 1.0.2 -> 1.0.3]
- lubridate    [repo: RSPM -> CRAN; ver: 1.8.0 -> 1.9.0]
- mgcv         [repo: RSPM -> CRAN; ver: 1.8-40 -> 1.8-41]
- modelr       [repo: RSPM -> CRAN; ver: 0.1.9 -> 0.1.10]
- nlme         [repo: RSPM -> CRAN; ver: 3.1-159 -> 3.1-161]
- processx     [repo: RSPM -> CRAN; ver: 3.7.0 -> 3.8.0]
- ps           [repo: RSPM -> CRAN; ver: 1.7.1 -> 1.7.2]
- purrr        [repo: RSPM -> CRAN; ver: 0.3.4 -> 1.0.0]
- rmarkdown    [repo: RSPM -> CRAN; ver: 2.16 -> 2.19]
- sass         [repo: RSPM -> CRAN; ver: 0.4.2 -> 0.4.4]
- stringr      [repo: RSPM -> CRAN; ver: 1.4.1 -> 1.5.0]
- sys          [repo: RSPM -> CRAN; ver: 3.4 -> 3.4.1]
- tidyselect   [repo: RSPM -> CRAN; ver: 1.1.2 -> 1.2.0]
- tinytex      [repo: RSPM -> CRAN; ver: 0.42 -> 0.43]
- vctrs        [repo: RSPM -> CRAN; ver: 0.4.2 -> 0.5.1]
- xfun         [repo: RSPM -> CRAN; ver: 0.33 -> 0.36]
- yaml         [repo: RSPM -> CRAN; ver: 2.3.5 -> 2.3.6]

# carpentries ========================
- openssl      [repo: RSPM -> carpentries; ver: 2.0.3 -> 2.0.5]
- stringi      [repo: RSPM -> carpentries; ver: 1.7.8 -> 1.7.10]

⏱️ In a few minutes, a comment will appear that will show you how the output has changed based on these updates.

If you want to inspect these changes locally, you can use the following code to check out a new branch:

git fetch origin update-36-packages-2023-01-03
git checkout update-36-packages-2023-01-03

• Auto-generated by create-pull-request via

[github-actions]

Thank you!

Thank you for your pull request 😃

🤖 This automated message can help you check the rendered files in your submission for clarity. If you have any questions, please feel free to open an issue in {sandpaper}.

If you have files that automatically render output (e.g. R Markdown), then you should check for the following:

• 🎯 correct output
• 🖼️ correct figures
• ❓ new warnings
• ‼️ new errors

Rendered Changes

🔍 Inspect the changes: https://github.com/carpentries-incubator/R-ecology-lesson/compare/md-outputs..md-outputs-PR-27

The following changes were observed in the rendered markdown documents:

 config.yaml (gone)                                 |   81 --
 fig/visualizing-ggplot-rendered-boxplot-1.png      |  Bin 27384 -> 27271 bytes
 ...visualizing-ggplot-rendered-boxplot-color-1.png |  Bin 69505 -> 68691 bytes
 fig/visualizing-ggplot-rendered-boxplot-fill-1.png |  Bin 68593 -> 67786 bytes
 ...isualizing-ggplot-rendered-boxplot-jitter-1.png |  Bin 404703 -> 406135 bytes
 ...lizing-ggplot-rendered-boxplot-label-wrap-1.png |  Bin 70597 -> 69774 bytes
 ...ualizing-ggplot-rendered-boxplot-outliers-1.png |  Bin 402047 -> 404990 bytes
 ...isualizing-ggplot-rendered-boxplot-points-1.png |  Bin 48153 -> 48028 bytes
 ...lot-rendered-customizing-challenge-answer-1.png |  Bin 779231 -> 774830 bytes
 ...visualizing-ggplot-rendered-element-blank-1.png |  Bin 649800 -> 656513 bytes
 fig/visualizing-ggplot-rendered-facet-wrap-1.png   |  Bin 555770 -> 554726 bytes
 fig/visualizing-ggplot-rendered-fill-na-1.png      |  Bin 633176 -> 631464 bytes
 fig/visualizing-ggplot-rendered-geom-color-1.png   |  Bin 652668 -> 656521 bytes
 fig/visualizing-ggplot-rendered-global-color-1.png |  Bin 653052 -> 646919 bytes
 fig/visualizing-ggplot-rendered-labels-1.png       |  Bin 800494 -> 795504 bytes
 ...visualizing-ggplot-rendered-legend-remove-1.png |  Bin 811011 -> 807800 bytes
 ...isualizing-ggplot-rendered-reverse-layers-1.png |  Bin 497903 -> 498593 bytes
 fig/visualizing-ggplot-rendered-text-size-1.png    |  Bin 653125 -> 650290 bytes
 fig/visualizing-ggplot-rendered-theme-bw-1.png     |  Bin 654364 -> 655342 bytes
 ...sualizing-ggplot-rendered-unnamed-chunk-1-1.png |  Bin 635911 -> 637699 bytes
 ...g-ggplot-rendered-violin-challenge-answer-1.png |  Bin 567894 -> 565018 bytes
 ...ggplot-rendered-violin-challenge-answer-2-1.png |  Bin 565509 -> 564672 bytes
 ...-data-rendered-date-plot-challenge-answer-1.png |  Bin 454671 -> 454275 bytes
 ...ata-rendered-time-series-challenge-answer-1.png |  Bin 212368 -> 212368 bytes
 md5sum.txt                                         |   28 +-
 renv.lock (gone)                                   | 1238 --------------------
 visualizing-ggplot.md                              |    8 +-
 working-with-data.md                               |    6 +-
 28 files changed, 23 insertions(+), 1338 deletions(-)

What does this mean?

If you have source files that require output and figures to be generated (e.g. R Markdown), then it is important to make sure the generated figures and output are reproducible.

This output provides a way for you to inspect the output in a diff-friendly manner so that it's easy to see the changes that occur due to new software versions or randomisation.

⏱️ Updated at 2023-01-03 01:14:34 +0000