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ensure that all venv use a python from cvmfs and use our wheelhouse #3

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merged 2 commits into from
Sep 23, 2024
Merged

ensure that all venv use a python from cvmfs and use our wheelhouse #3

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fdddf9e
ensure that all venv use a python from cvmfs and use our wheelhouse
mboisson Sep 23, 2024
89184d0
removed undue tab in config.yaml
mboisson Sep 23, 2024
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6 changes: 3 additions & 3 deletions cgpu101/config.yaml
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Expand Up @@ -21,16 +21,16 @@
def: true
lock: true
ui:
def: 'lab' # ['notebook', 'lab', 'terminal']

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SlurmFormSpawner:
disable_form: true
start_timeout: 900

lookup_options:
jupyterhub::kernel::venv::pip_environment:
merge: deep
jupyterhub::kernel::venv::python: /cvmfs/soft.computecanada.ca/easybuild/software/2020/avx2/Core/python/3.10.2/bin/python3

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jupyterhub::kernel::venv::prefix: /opt/ipython-kernel-3.10
jupyterhub::kernel::venv::pip_environment:
PIP_NO_INDEX: 1
PIP_CONFIG_FILE: /cvmfs/soft.computecanada.ca/config/python/pip-avx2-gentoo.conf
jupyterhub::kernel::venv::packages: ['cupy', 'jax==0.4.2', 'torchvision', 'matplotlib']

profile::freeipa::mokey::enable_user_signup: false
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5 changes: 0 additions & 5 deletions cip201/config.yaml
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Expand Up @@ -25,11 +25,6 @@ jupyterhub::jupyterhub_config_hash:
SlurmFormSpawner:
disable_form: true

lookup_options:
jupyterhub::kernel::venv::pip_environment:
merge: deep
jupyterhub::kernel::venv::pip_environment:
PIP_NO_INDEX: 1
jupyterhub::kernel::venv::packages: ['numpy', 'cupy']

profile::slurm::base::suspend_time: 7200
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8 changes: 0 additions & 8 deletions ciq101/config.yaml
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Expand Up @@ -22,14 +22,6 @@ jupyterhub::jupyterhub_config_hash:
SlurmFormSpawner:
disable_form: true

jupyterhub::kernel::venv::python: /cvmfs/soft.computecanada.ca/easybuild/software/2023/x86-64-v3/Compiler/gcccore/python/3.11.5/bin/python3
jupyterhub::kernel::venv::prefix: /opt/ipython-kernel-3.11
lookup_options:
jupyterhub::kernel::venv::pip_environment:
merge: deep
jupyterhub::kernel::venv::pip_environment:
PIP_NO_INDEX: 1
PIP_CONFIG_FILE: /cvmfs/soft.computecanada.ca/config/python/pip-x86-64-v3-gentoo2023.conf
jupyterhub::kernel::venv::packages: ['pennylane==0.37.0']

profile::software_stack::lmod_default_modules: ['StdEnv/2023', 'python/3.11']
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5 changes: 0 additions & 5 deletions cirq/config.yaml
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Expand Up @@ -22,11 +22,6 @@ jupyterhub::jupyterhub_config_hash:
SlurmFormSpawner:
disable_form: true

lookup_options:
jupyterhub::kernel::venv::pip_environment:
merge: deep
jupyterhub::kernel::venv::pip_environment:
PIP_NO_INDEX: 1
jupyterhub::kernel::venv::packages: ['cirq==1.1.0']

profile::accounts::skel_archives:
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8 changes: 8 additions & 0 deletions common/config.yaml
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Expand Up @@ -21,6 +21,14 @@
profile::slurm::base::slurm_version: '23.02'

profile::software_stack::lmod_default_modules: ['StdEnv/2023']
jupyterhub::kernel::venv::python: /cvmfs/soft.computecanada.ca/easybuild/software/2023/x86-64-v3/Compiler/gcccore/python/3.11.5/bin/python3

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jupyterhub::kernel::venv::prefix: /opt/ipython-kernel-3.11
lookup_options:
jupyterhub::kernel::venv::pip_environment:
merge: deep
jupyterhub::kernel::venv::pip_environment:
PIP_NO_INDEX: 1
PIP_CONFIG_FILE: /cvmfs/soft.computecanada.ca/config/python/pip-x86-64-v3-gentoo2023.conf

prometheus::global_config:
scrape_interval: '1m'
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8 changes: 0 additions & 8 deletions dat201/config.yaml
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Expand Up @@ -22,15 +22,7 @@ jupyterhub::jupyterhub_config_hash:
SlurmFormSpawner:
disable_form: true

lookup_options:
jupyterhub::kernel::venv::pip_environment:
merge: deep
jupyterhub::kernel::venv::pip_environment:
PIP_NO_INDEX: 1

jupyterhub::kernel::venv::packages: ['numpy', 'pandas', 'matplotlib', 'plotnine', 'altair']
jupyterhub::kernel::venv::python: "/cvmfs/soft.computecanada.ca/easybuild/software/2020/avx2/Core/python/3.11.5/bin/python"
profile::software_stack::lmod_default_modules: ['StdEnv/2020']

profile::accounts::skel_archives:
- filename: analyse-donnees-python-main.zip
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6 changes: 3 additions & 3 deletions dat202/config.yaml
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Expand Up @@ -22,11 +22,11 @@
SlurmFormSpawner:
disable_form: true

lookup_options:
jupyterhub::kernel::venv::pip_environment:
merge: deep
jupyterhub::kernel::venv::python: /cvmfs/soft.computecanada.ca/easybuild/software/2020/avx2/Core/python/3.9.6/bin/python3

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jupyterhub::kernel::venv::prefix: /opt/ipython-kernel-3.9
jupyterhub::kernel::venv::pip_environment:
PIP_NO_INDEX: 1
PIP_CONFIG_FILE: /cvmfs/soft.computecanada.ca/config/python/pip-avx2-gentoo.conf
jupyterhub::kernel::venv::packages: ['pyspark', 'numpy', 'pandas<2.0.0']


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9 changes: 1 addition & 8 deletions example/config.yaml
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Expand Up @@ -21,23 +21,16 @@
def: true
lock: true
ui:
def: 'lab' # ['notebook', 'lab', 'terminal']

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SlurmFormSpawner:
disable_form: true
start_timeout: 900

lookup_options:
jupyterhub::kernel::venv::pip_environment:
merge: deep
jupyterhub::kernel::venv::pip_environment:
PIP_NO_INDEX: 1
jupyterhub::kernel::venv::packages: ['cupy', 'jax==0.4.2', 'torchvision', 'matplotlib']
jupyterhub::kernel::venv::packages: ['cupy', 'jax==0.4.30', 'torchvision', 'matplotlib']

profile::freeipa::mokey::enable_user_signup: true
profile::freeipa::mokey::require_verify_admin: false

profile::software_stack::lmod_default_modules: ['StdEnv/2020', 'gcc', 'cuda/11.4']

profile::accounts::skel_archives:
- filename: cache.zip
source: https://drive.google.com/uc?id=1vwrd7xNAy9WwFQLbSbZuBPQ0YtupiNnH&export=download
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7 changes: 3 additions & 4 deletions lab101/config.yaml
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Expand Up @@ -22,13 +22,12 @@ jupyterhub::jupyterhub_config_hash:
SlurmFormSpawner:
disable_form: true

lookup_options:
jupyterhub::kernel::venv::pip_environment:
merge: deep
jupyterhub::kernel::venv::python: /cvmfs/soft.computecanada.ca/easybuild/software/2020/avx2/Core/python/3.10.2/bin/python3
jupyterhub::kernel::venv::prefix: /opt/ipython-kernel-3.10
jupyterhub::kernel::venv::pip_environment:
PIP_NO_INDEX: 1
PIP_CONFIG_FILE: /cvmfs/soft.computecanada.ca/config/python/pip-avx2-gentoo.conf
jupyterhub::kernel::venv::packages: ['numpy', 'matplotlib']

profile::software_stack::lmod_default_modules: ['StdEnv/2020', 'ir-kernel/4.2', 'ijulia-kernel/1.8']

profile::accounts::skel_archives:
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8 changes: 3 additions & 5 deletions pyt101/config.yaml
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Expand Up @@ -22,13 +22,11 @@
SlurmFormSpawner:
disable_form: true

lookup_options:
jupyterhub::kernel::venv::pip_environment:
merge: deep
jupyterhub::kernel::venv::python: /cvmfs/soft.computecanada.ca/easybuild/software/2020/avx2/Core/python/3.10.2/bin/python3

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jupyterhub::kernel::venv::prefix: /opt/ipython-kernel-3.10
jupyterhub::kernel::venv::pip_environment:
PYTHONPATH: "/cvmfs/soft.computecanada.ca/custom/python/site-packages"
PIP_CONFIG_FILE: "/cvmfs/soft.computecanada.ca/config/python/pip-%{facts.cpu_ext}-gentoo.conf"
PIP_NO_INDEX: 1
PIP_CONFIG_FILE: /cvmfs/soft.computecanada.ca/config/python/pip-avx2-gentoo.conf
jupyterhub::kernel::venv::packages: ['numpy<2', 'pandas', 'matplotlib']
profile::software_stack::lmod_default_modules: ['StdEnv/2020']

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7 changes: 3 additions & 4 deletions pyt301/config.yaml
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Expand Up @@ -21,16 +21,15 @@
def: true
lock: true
ui:
def: 'lab' # ['notebook', 'lab', 'terminal']

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SlurmFormSpawner:
disable_form: true


lookup_options:
jupyterhub::kernel::venv::pip_environment:
merge: deep
jupyterhub::kernel::venv::python: /cvmfs/soft.computecanada.ca/easybuild/software/2020/avx2/Core/python/3.10.2/bin/python3
jupyterhub::kernel::venv::prefix: /opt/ipython-kernel-3.10
jupyterhub::kernel::venv::pip_environment:
PIP_NO_INDEX: 1
PIP_CONFIG_FILE: /cvmfs/soft.computecanada.ca/config/python/pip-avx2-gentoo.conf
jupyterhub::kernel::venv::packages: ['numba==0.53.1', "numpy==1.23.5", 'pycuda', 'matplotlib']

profile::software_stack::lmod_default_modules: ['StdEnv/2020', 'gcc', 'cuda']
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5 changes: 0 additions & 5 deletions pyt302/config.yaml
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Expand Up @@ -25,11 +25,6 @@ jupyterhub::jupyterhub_config_hash:
SlurmFormSpawner:
disable_form: true

lookup_options:
jupyterhub::kernel::venv::pip_environment:
merge: deep
jupyterhub::kernel::venv::pip_environment:
PIP_NO_INDEX: 1
jupyterhub::kernel::venv::packages: ['cupy']

profile::accounts::skel_archives:
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