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SpaGCN: Integrating gene expression, spatial location and histology to identify spatial domains and spatially variable genes by graph convolutional network

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SpaGCN v1.2.7 pca_custom

git clone https://github.com/caiquanyou/SpaGCN

cd SpaGCN/SpaGCN_package/

python3 setup.py install --user

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SpaGCN: Integrating gene expression, spatial location and histology to identify spatial domains and spatially variable genes by graph convolutional network

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  • Python 62.2%
  • Jupyter Notebook 37.8%