Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Updating Directory Structure of Metadata and Profiles #30

Merged
merged 3 commits into from
May 12, 2020
Merged

Updating Directory Structure of Metadata and Profiles #30

merged 3 commits into from
May 12, 2020

Conversation

gwaybio
Copy link
Member

@gwaybio gwaybio commented May 11, 2020

closes #23

@gwaybio gwaybio requested a review from shntnu May 11, 2020 21:55
shntnu
shntnu approved these changes May 12, 2020
View reviewed changes
Copy link
Collaborator

@shntnu shntnu left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

The new locations LGTM

@gwaybio gwaybio merged commit 7f59d63 into broadinstitute:master May 12, 2020
@gwaybio gwaybio deleted the update-directory-structure branch May 12, 2020 11:21
@shntnu
Copy link
Collaborator

shntnu commented May 12, 2020 •
edited
Loading

Oh wait; the metadata/platemaps folder should look like this

platemaps/
├── 2016_04_01_a549_48hr_batch1
│   ├── barcode_platemap.csv
│   └── platemap
│       ├── C-7161-01-LM6-001.txt
│       ├── C-7161-01-LM6-002.txt
│       ├── C-7161-01-LM6-003.txt

The nesting you have is different

@shntnu
Copy link
Collaborator

shntnu commented May 12, 2020

@gwaygenomics Can you go ahead and fix that; easier that way that my trying to move things around.

@gwaybio
Copy link
Member Author

gwaybio commented May 12, 2020

oh shoot - good catch. Yes, will do

gwaybio added a commit to gwaybio/lincs-cell-painting that referenced this pull request May 12, 2020
@gwaybio
reorder metadata structure
9d16447 
see broadinstitute#30 (comment)
@gwaybio gwaybio mentioned this pull request May 12, 2020
Merged
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Reviewers

@shntnu shntnu shntnu approved these changes

Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

Successfully merging this pull request may close these issues.

Define folder structure
2 participants
@gwaybio @shntnu