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cd.yaml
211 workflow runs
211 workflow runs

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cd cd #585: Manually run by bkieft-usa
November 7, 2024 23:21 2m 19s msms_frag_export
msms_frag_export
November 7, 2024 23:21 2m 19s
Untargeted dev cd #584: Pull request #975 closed by bkieft-usa
November 7, 2024 20:09 1m 31s untargeted_dev
untargeted_dev
November 7, 2024 20:09 1m 31s
Replace NaN with 0 in forced integer columns of LIMS tables cd #583: Pull request #974 closed by bkieft-usa
November 7, 2024 19:44 2m 29s untargeted_dev
untargeted_dev
November 7, 2024 19:44 2m 29s
Untargeted dev cd #582: Pull request #973 closed by bkieft-usa
November 7, 2024 17:41 1m 54s untargeted_dev
untargeted_dev
November 7, 2024 17:41 1m 54s
Change rules for determining mzmine batch params - assume more lenient filters if machine name cannot be validated cd #581: Pull request #970 closed by bkieft-usa
November 7, 2024 17:12 2m 22s untargeted_dev
untargeted_dev
November 7, 2024 17:12 2m 22s
Amend MS2 filter for mzML files for redoing EGSB projects cd #580: Pull request #969 closed by bkieft-usa
November 6, 2024 19:13 1m 35s untargeted_dev
untargeted_dev
November 6, 2024 19:13 1m 35s
Add debug lines for gdrive upload cd #579: Pull request #966 closed by bkieft-usa
November 4, 2024 16:44 3s gdrive_upload_failure
gdrive_upload_failure
November 4, 2024 16:44 3s
cd cd #578: Manually run by bkieft-usa
October 31, 2024 18:07 2m 43s gdrive_upload_failure
gdrive_upload_failure
October 31, 2024 18:07 2m 43s
cd cd #577: Manually run by bkieft-usa
October 29, 2024 17:20 1m 37s msms_hits_sorter
msms_hits_sorter
October 29, 2024 17:20 1m 37s
cd cd #576: Manually run by bkieft-usa
October 22, 2024 23:30 51s main
main
October 22, 2024 23:30 51s
Targeted h5file tracker cd #575: Pull request #964 closed by bkieft-usa
October 22, 2024 23:27 2m 22s targeted_h5file_tracker
targeted_h5file_tracker
October 22, 2024 23:27 2m 22s
cd cd #574: Manually run by bkieft-usa
October 22, 2024 22:34 1m 54s targeted_h5file_tracker
targeted_h5file_tracker
October 22, 2024 22:34 1m 54s
Turn off 'too many projects' protection error for full redo cd #573: Pull request #963 closed by bkieft-usa
October 21, 2024 16:33 3m 29s untargeted_dev
untargeted_dev
October 21, 2024 16:33 3m 29s
Remove outdated argument checker to allow for skipping steps cd #572: Pull request #962 closed by bkieft-usa
October 15, 2024 23:09 1m 51s untargeted_dev
untargeted_dev
October 15, 2024 23:09 1m 51s
Move gnps2 creds to shared location for the metatlas group to access cd #571: Pull request #961 closed by bkieft-usa
October 15, 2024 18:39 2m 21s untargeted_dev
untargeted_dev
October 15, 2024 18:39 2m 21s
feat: walk local directory during raw data mirror to find correct files cd #570: Pull request #960 closed by bkieft-usa
October 15, 2024 16:51 2m 0s untargeted_dev
untargeted_dev
October 15, 2024 16:51 2m 0s
Force search of other raw data dirs when project name is non conforming cd #569: Pull request #959 closed by bkieft-usa
October 15, 2024 16:26 3m 8s untargeted_dev
untargeted_dev
October 15, 2024 16:26 3m 8s
feat: divert log to standard output for debugging cd #568: Pull request #958 closed by bkieft-usa
October 14, 2024 21:33 1m 29s untargeted_dev
untargeted_dev
October 14, 2024 21:33 1m 29s
feat: ability to define the location of raw data on disk or have the untargeted pipeline infer it cd #567: Pull request #957 closed by bkieft-usa
October 11, 2024 22:12 2m 22s untargeted_dev
untargeted_dev
October 11, 2024 22:12 2m 22s
feat: calcuate RT quality differently between C18 and HILIC cd #566: Pull request #956 closed by bkieft-usa
October 11, 2024 22:09 2m 2s compound_id_sheet_dev
compound_id_sheet_dev
October 11, 2024 22:09 2m 2s
cd cd #565: Manually run by bkieft-usa
October 11, 2024 21:08 8m 25s compound_id_sheet_dev
compound_id_sheet_dev
October 11, 2024 21:08 8m 25s
Allow for sync from LIMS to NERSC to occur even when --direct_input is supplied cd #564: Pull request #955 closed by bkieft-usa
October 10, 2024 22:43 1m 33s untargeted_dev
untargeted_dev
October 10, 2024 22:43 1m 33s
Skip result file renaming inside results zip (readability reaname) if the project name doesn't conform cd #563: Pull request #954 closed by bkieft-usa
October 10, 2024 22:22 2m 13s untargeted_dev
untargeted_dev
October 10, 2024 22:22 2m 13s
Fix default behavior of flags passed to untargeted pipeline cd #562: Pull request #953 closed by bkieft-usa
October 10, 2024 21:02 1m 32s untargeted_dev
untargeted_dev
October 10, 2024 21:02 1m 32s
Allow GNPS2 mirror to be parameterized and passed as command line argument cd #561: Pull request #952 closed by bkieft-usa
October 10, 2024 19:51 2m 26s untargeted_dev
untargeted_dev
October 10, 2024 19:51 2m 26s