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cd.yaml
211 workflow runs
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Upgrade MZmine3 to MZmine4 cd #611: Pull request #1004 closed by bkieft-usa
December 11, 2024 19:11 3m 14s untargeted_dev
untargeted_dev
December 11, 2024 19:11 3m 14s
Untargeted dev cd #610: Pull request #1003 closed by bkieft-usa
December 10, 2024 23:39 1m 29s untargeted_dev
untargeted_dev
December 10, 2024 23:39 1m 29s
Untargeted dev cd #609: Pull request #1001 closed by bkieft-usa
December 10, 2024 23:24 2m 38s untargeted_dev
untargeted_dev
December 10, 2024 23:24 2m 38s
Untargeted dev cd #608: Pull request #1000 closed by bkieft-usa
December 10, 2024 22:59 1m 32s untargeted_dev
untargeted_dev
December 10, 2024 22:59 1m 32s
Allow for FPS files to pass new project filter and get synced between LIMS and NERSC cd #607: Pull request #999 closed by bkieft-usa
December 10, 2024 22:16 2m 43s untargeted_dev
untargeted_dev
December 10, 2024 22:16 2m 43s
Untargeted dev cd #606: Pull request #998 closed by bkieft-usa
December 10, 2024 20:14 1m 53s untargeted_dev
untargeted_dev
December 10, 2024 20:14 1m 53s
Add the ability to define a custom mzmine batch params xml file cd #605: Pull request #996 closed by bkieft-usa
December 7, 2024 00:09 2m 54s untargeted_dev
untargeted_dev
December 7, 2024 00:09 2m 54s
feat: add additional allowed adducts cd #604: Pull request #994 closed by tharwood3
November 21, 2024 22:14 1m 33s extend_adducts
extend_adducts
November 21, 2024 22:14 1m 33s
Add boolean for using polarity subdirectory during raw data mirror to GNPS2 cd #603: Pull request #993 closed by bkieft-usa
November 20, 2024 19:32 3m 3s untargeted_mirror
untargeted_mirror
November 20, 2024 19:32 3m 3s
Add raw data mirror as substep in untargeted workflow in addition to in-line mirror cd #602: Pull request #992 closed by bkieft-usa
November 20, 2024 19:08 1m 34s untargeted_mirror
untargeted_mirror
November 20, 2024 19:08 1m 34s
Upgrade matchms library from 0.20.0 to 0.28.2 cd #601: Pull request #991 closed by bkieft-usa
November 20, 2024 17:07 2m 58s matchms_upgrade
matchms_upgrade
November 20, 2024 17:07 2m 58s
Add new bailout conditions to avoid download errors in FBMN fetch cd #600: Pull request #990 closed by bkieft-usa
November 15, 2024 19:31 1m 35s untargeted_dev
untargeted_dev
November 15, 2024 19:31 1m 35s
Handle exceptions when FBMN fails and reattempt submission cd #599: Pull request #989 closed by bkieft-usa
November 15, 2024 19:11 2m 36s untargeted_dev
untargeted_dev
November 15, 2024 19:11 2m 36s
Untargeted dev cd #598: Pull request #988 closed by bkieft-usa
November 15, 2024 18:48 2m 12s untargeted_dev
untargeted_dev
November 15, 2024 18:48 2m 12s
Handle errors in SFTP mirror with try/except and reattempt connection when reset by peer cd #597: Pull request #986 closed by bkieft-usa
November 15, 2024 18:17 2m 37s untargeted_dev
untargeted_dev
November 15, 2024 18:17 2m 37s
Untargeted dev cd #596: Pull request #985 closed by bkieft-usa
November 15, 2024 17:53 1m 32s untargeted_dev
untargeted_dev
November 15, 2024 17:53 1m 32s
Skip download logging for completed projects so it doesn't fill log out cd #595: Pull request #984 closed by bkieft-usa
November 14, 2024 22:43 2m 23s untargeted_dev
untargeted_dev
November 14, 2024 22:43 2m 23s
Add logging info for bailout conditions cd #594: Pull request #983 closed by bkieft-usa
November 14, 2024 21:25 1m 41s untargeted_dev
untargeted_dev
November 14, 2024 21:25 1m 41s
Fix empty string error for filling in integer LIMS table field cd #593: Pull request #982 closed by bkieft-usa
November 14, 2024 16:59 2m 28s untargeted_dev
untargeted_dev
November 14, 2024 16:59 2m 28s
modify project/file name check to handle NoneTypes cd #592: Pull request #981 closed by bkieft-usa
November 12, 2024 20:57 1m 52s untargeted_dev
untargeted_dev
November 12, 2024 20:57 1m 52s
Add new raw data subdirectories to mirror walk cd #591: Pull request #980 closed by bkieft-usa
November 12, 2024 20:32 3m 29s untargeted_dev
untargeted_dev
November 12, 2024 20:32 3m 29s
fix: upgrade version of git and git-man to squash bug cd #589: Pull request #978 closed by bkieft-usa
November 12, 2024 20:18 1m 36s git_update
git_update
November 12, 2024 20:18 1m 36s
cd cd #588: Manually run by bkieft-usa
November 12, 2024 20:14 2m 35s git_update
git_update
November 12, 2024 20:14 2m 35s
cd cd #587: Manually run by bkieft-usa
November 12, 2024 19:41 1m 43s git_update
git_update
November 12, 2024 19:41 1m 43s
Add new raw data subdirectories to mirror walk cd #586: Pull request #977 closed by bkieft-usa
November 12, 2024 19:14 1m 35s untargeted_dev
untargeted_dev
November 12, 2024 19:14 1m 35s