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SB Molecular weight
Steve Bond edited this page Oct 15, 2015
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Calculates the molecular weight, in daltons, of all protein, DNA, or RNA molecules.
>Mle-Panxα12 cDNA - ML25997a.
MVIDILSGFKGITPFKGITLDDGWDQINRSFMFVLCVLMGTVVTVRQYAGGIISCDGFTK
YSGSFSEDYCWTQGLYTIKEAYDLLTMNVPYPGVIPEDMPTCIERELINGGRVSCPDPET
VKPPTRVYHLWYQWVPFYFWLAAAAFFFPYLIYKHFGVGDLKPLIQMLHNPIVDEGDQNC
MAEKASMWLFYKLNVFMNENTIFAILTEKHRLFFIVMLVKVLYLIISILALYLTDEMFHI
GSFVSYGSEWATSLPEGDNETTLVKDKLFPKMVACEIKRWGPTGLEEEQGMCVLAPNVIN
QYLFLILWFAIIFCIACNCLSVLFALTKLVFVLGSYKRLLASAFLKDELHYKHMFFNIGT
SGRVLLQIVATNVSPRVFESIMANLATKLIAERLKGNGKGSV*
>Mle-Panxα9 cDNA - ML47742a.
MLDILSKFKGVTPFKGITIDDGWDQLNRSFMFVLLVVMGTTVTVRQYTGSVISCDGFKKF
GSTFAEDYCWTQGLYTVLEGYDQPSQNIPYPGLLPDEAPPCTPVRLKDGTRLKCPDPDQL
LSPTRISHLWYQWVPFYFWLAAAAFFMPYLLYKNFGMGDIKPLVRLLHNPVESDQELKKM
TDKAATWLFYKFDLYMSEQSLLASLTRKHGLGLSMVFVKILYAAVSFGCFLLTAEMFSIG
DFKTYGSEWIKKLKLEDNLATEEKDKLFPKMVACEVKRWGASGIEEEQGMCVLAPNVINQ
YLFLILWFCLVFVMFCNIVSIFASLIKLLFTYGSYRRLLSTAFLRDDSAIKHMYFNVGSS
GRLILHVLANNTAPRVFEDILLTLAPKLIQRKLRGNGKAL*
>Mle-Panxα10B cDNA - ML32831a-2.
MRLSEKSTSHDCKACITRSHNEDCARRWGITIDDGWDQLNRSFMFGLLVVMGTTVTVRQY
TGSVISCDGFKKFGSTFAEDYCWTQGQYTVLEGYDQPNQNIPCPVPRPPSRRGSTLNTMS
QTQGFLHNPVESDQELKKMTDKAATWLFYKFDLYMSEQSLLASLTNKHGLGLSVVFVKIL
YAAVSFGCFLLTADMFSIGDFKTYGSEWINKLKLEDNLATEEKDKLFPKMVACEVKRWGA
SGIEEEQGMCVLAPNVINQYLFLILWFCLVFVMFCNIVSIFASLIKLLFTYGSYRRLLST
AFLRDDSAIKHMYFNVGSSGRLILHVLANNTAPRVFEDILLTLAPKLIQRKLRAKDYD*
$: sb Mnemiopsis_pep.fa -mw
ID Protein
Mle-Panxα12 45692.99
Mle-Panxα9 45619.81
Mle-Panxα10B 40727.33
3 1952
Mle-Panxα9 ---------atgttagacatactttcaaagtttaaaggagttactcctt---ttaaaggtataacgatagatgacgggtgggatcaactcaatcggagttttatgtt-----------cgtcctgctcgttgtcatgggaacgactgtcactgtccggcaatacaccggcagtgt---catcagttgtgacggctt---------caaaaagtttggatccacttttgcggaggattactgttggacccagggactgtacacagttttagaaggatatgaccaacccagccaaaatatcccttacccaggcctccttccagacg-----aggcaccaccctgt---------acaccagtcagactcaaggacggtacgaggttaaagtgcccagaccctgatcagttgttgtcaccgacgcggatatcccacctatggtaccagtgggtccctttttacttctggttggcggctgctgccttcttcatgccctaccttctgtacaagaattttggcatgggagatatcaagcctctcgtgagattactacacaatccagtagaatcagaccaggagttaaagaagatgacagacaaggctgcaacatggctgttctacaagtttgacctgtacatgagcgaacagtcgctcctagcaagtctc---------------accagaaaacac------------ggtcttggtctatccatggtctttgtaaagatcctatacgccgcagtgtcgttcgggtgtttcctcctgaccgctgagatgttctcaattggagattttaaaacctatgg------atcagaatggatcaagaagttaaagttggaagataatctagctacggaggaaa--------aggataaactttttcctaagatggtggcatgtgaagtgaaacgctggggtgcatcaggtattgaggaggaacaagggatgtgtgtcctggcccccaacgtaatcaaccaatacctcttccttattctctggttctgtctggtattcgtgatgttctgcaacattgtctccatattcgcctccctcatcaagctcctcttcacctacggctcctaccgccgcctcctttccaccgccttcctgagggacgactccgccatcaaacaca---------tgtacttcaacgtggggtcgtcagggagattgatattgcacgtgctggcgaacaacaccgccccgcgcgtcttcgaggacatcctgct-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------gaccctggcccccaagctgatccaacgg-------------------------------------aaactcagaggtaacggaaaagc-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------tttgtag-----
Mle-Panxα7A atg---ggggtggaaattctgtttcccataatcaacagagccaccgctccgatcaagtctgttaacatcgacgatttgagtagtcagctcaaccgaacttttatgtt-----------ttacttatcgctgactttcgccatcactatcaccatcaggcagcagctaggcggagcgtacattgcttgtgacggattctccagagacgaggaatatgaac---ggtttgcagaggagtggtgctggagtagtggaatctacactatcaaggaggcttatgagatgagcaacagagtcagcccttatccgggaataatcccagaaa-----atctaccagcctgt---------atagagatggagctgatatctgggggcagagtagagtgtcctgaagagaaagacgtcaagcctttcaccaggatataccaatcttggtacccatttgtgatgttttactattggctgactgctttgatgtttttcttgccgtaccagctttacaaggtctttggttttgaagacgtcaaagcggttgtagctatgttgcagaacccggtagaggatggctttgagaagaaggagctgataaaaaggggttcagtgtggctgtatcttaaatctacaatgaccctttccaacccttcagtttactcgagcttc---------------atcgtgaaacac------------agcctagctttctacgctcttactgtcaaggttatgtatttggggaacacacttcttatgtactggctgactcacaaaatgttcaagtttggatcgtttgcggagtacgg------tcttctctgggacacaa-----------gaaacccacttaacaacgtccagagccttgttcaagagaaattgttcccaaaagttgcagcgtgcgaagtaaagcgctttggtgcatcgggacttgaggaggaccaaggtatgtgcatgctggctctaaacgtccttaaccagtacctcttcttaatcttctggttctgtctccttttcgtgacaatagtcaacaccatatccctcctcctcaccctccttaacatcatctctccttgctttatgctccaacagtttctcctggcctcctctcttgataggagtccagctgtcggtgtcatatccaagctgtatcttgactgtggttcctcgctaaggttcatcatgactatatttgcttggaatgtagacccaaaattgtttggggagattttagtacagctcaactctctccttgccaaggatgaatcgcccagggctgaagtgctgaagcggcgttcaaaaaaagtgaaagttccaagtccaagaaagcctaaactcttatttcatgaagaaattaagaaaaagttaataaagaggactgaacgaaaagatgataacctaaccaatttcacgaatatgtcgaaaattagcaagaagtttgaaggcctcaaaaaaagaaatctccttcagacgaaaagcatcattaatgtaagcgttcctaagaaaatgagcgagttagaagtagaagaagatttcattcttactcctactgaagaaagtggtatccaaaacaaccctgacaccaagtatgctcaagaggatgtactggactcagagtacgtagtggtggaacaatcagtcccagaaacaatgacagagcaggaatcagtggaggaatcagtcccagagataagtaaagctgagcaagaaggcgggagctcagatcacatcgatgttgaggagaccccgccagcatcagatgttgatcgcgaagtcaactctccgattgttcagcacgaatatcaggttcagatcgacttggtttccgacgatggaagcgcccatcgtttatcgtcagatgaagctctttttccgctgcggatccctattgtgaaattgaatggcgatgttctgtcattaagatccgagagtttgcagtaa--
Mle-Panxα1 atgtactggatatttgagatttgtcaagagataaagcgagctcaatcct---gccgaaagttcgcgatagacggaccattcgactggacgaaccggattatcatgccaacactcatggtaatctgctgctttctccaaaccttcaccttcatgttcggcagca--------------acatcagctgtatcggctt---------cgagaagttggaaaggaactttgtggaggagtactgctggacccagggtatctatacaagcaaggctgcgtataacatgcc---attacatactccctacccggggattgccccctgtgtgcccgagtatgatcccgtgactcagaagtattggttaccctgtggggtggaggaagaagacaaggct-----------------------------------tatcatttgtggtatcagtgggttccgttttactttctcgctgtggccgtgggttattatttgccatttcttatcttgaagggttcaaagctgcatcaggtgaagccgctgattacgtatttgatgaaccagaggaacctggagactgatcctaaccatttggtaggaaagctatcgcattgg------------------------atcttcagacagcttgtttattcaaggtttgcggccacctctacaatcagaatgtactggcacgactgggggcttgtcctccttgtttgctctgtaaagatcctctaccttaccgtctctcttatccacctctttgccactgccaagatgttccacatcggcaactggtttacgtacgggatcatgttcgcgcggcgcagca-----------acagtcacactacccacg------------ttaaggatgtgttcttcccgaagatggtggcctgtaagatcgagacatggagtttcacagggaagaatcatcttcacgggatgtgtgttttagctctgaacgtgatgaaccaatatttgtttttgatcgtgtggtacgtcaacgtaatcatcatcttcctcaacagtatcagctgtatttacactatagtcaagttttgtagccctaacatcgttcaccaccggatagtcaactcctcctccttagacgaccaccatgactttacccgga---------tgtttggttatgtgggaccttccggacggataatcctggctaaaatgtcggaacata------------tgccggggtacatgctgaaac------------------------------------------------------------------------------------------------------------------aagtagccaagaaggtgacagagaagatagatatagagaatgaaaa--------------------------------------------------------------------------------------------------------------------------gaatagagggag-----------------------------------------agccccgactattaagtttaccaaggtt----------------------aacggtca-------gccctcagagctggccagacagc--------------------ctctcatgca-----------------------------cctgaacgctctgatgttagggatggttcctcagaatctacca-----------------------------------gaacctaaaattcaga--------atatccaacggtcgcag---------------------------------------------------------------------------------aaaaaagtacggtttctggtttaa
`$: sb Mnemiopsis_cds.phy -mw`
ID ssDNA dsDNA
Mle-Panxα9 371242.6 743477.1
Mle-Panxα7A 579960.0 1158618.9
Mle-Panxα1 414459.2 828720.3