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Rats source package v0.2.0

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@fruce-ki fruce-ki released this 02 Sep 19:36
· 410 commits to master since this release

Changes and new features from v0.1.0 to v0.2.0

  1. Added the ability to extract transcript and gene IDs for the annotation table directly from a .GTF file.
  2. Confidence threshold introduced. This allows the confidence derived from the bootstraps to be used as an additional criterion in calling DTU.
  3. conf boolean flag introduced to the results tables, indicating whether the DTU call for the entry passes the confidence threshold.
  4. The names of the bootstrap-related columns in the results tables have been slightly modified to be less cryptic.