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Published trees can have different formats of tip labels, eg. ott_id, species_name, speciesname_ottid, order family speciesname,...
We need to get an overview of the frequency of these kinds of labels, and either provide a clean-up script, or describe that the user needs to clean up the tree before uploading.
Published trees can have different formats of tip labels, eg. ott_id, species_name, speciesname_ottid, order family speciesname,...
We need to get an overview of the frequency of these kinds of labels, and either provide a clean-up script, or describe that the user needs to clean up the tree before uploading.
A function to remove ott_id's already exist, namely rotl::strip_ott_ids.
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