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local_tester.php
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local_tester.php
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<!DOCTYPE html>
<html lang="en">
<head>
<meta charset="utf-8">
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="description" content="">
<meta name="author" content="">
<title>CTV demo </title>
<script type="text/javascript" src="Scripts/jquery.js"></script>
<script type="text/javascript" src="js/jquery.form.js"></script>
<script type="text/javascript" src="Scripts/script.js"></script>
<link rel="stylesheet" href="http://code.jquery.com/ui/1.10.3/themes/smoothness/jquery-ui.css">
<script src="http://code.jquery.com/ui/1.10.3/jquery-ui.js"></script>
<script type="text/javascript" language="javascript" src="Scripts/jsme.nocache.js"></script>
<!-- Bootstrap core CSS -->
<link rel="stylesheet" href="http://maxcdn.bootstrapcdn.com/bootstrap/3.3.5/css/bootstrap.min.css">
<script src="http://maxcdn.bootstrapcdn.com/bootstrap/3.3.5/js/bootstrap.min.js"></script>
<!-- <link href="css/bootstrap.css" rel="stylesheet"> -->
<!-- Custom styles for this template -->
<link href="css/jumbotron.css" rel="stylesheet">
<script>
function jsmeOnLoad() {
jsmeApplet = new JSApplet.JSME("jsme_container", "350px", "290px");
document.JME = jsmeApplet;
}
function getSmiles() {
var data = document.JME.smiles();
document.getElementById("compoundNames").value = data;
}
</script>
<script type="text/javascript">
$(document).ready(function(event) {
$('#form1').ajaxForm(function(data)
{
$('#ctvInfo').replaceWith(data);
$('#file_check').css("display", "block");
});
});
</script>
</head>
<body>
<nav class="navbar navbar-inverse">
<div class="container-fluid">
<div class="navbar-header">
<a class="navbar-brand" href="http://toxvalue.org/">CTV Demo</a>
</div>
<div class="collapse navbar-collapse" id="myNavbar">
<ul class="nav navbar-nav">
<li class="active"><a href="http://toxvalue.org/"><span class="glyphicon glyphicon-home"></span> Home</a></li>
</ul>
<ul class="nav navbar-nav navbar-right">
<li id="Contact"><a href="#"><span class="glyphicon glyphicon-phone-alt"></span> Contact</a></li>
<li><a href="#"><span class="glyphicon glyphicon-info-sign"></span> About</a></li>
<div style="visibility: hidden">
<div id="Contact_dialog" title="Contact Information">
<p>For any questions or to be notified of future updates to ToxValue.org, please send an email to <a href="mailto:conditionaltoxvalue@gmail.com" target="_blank">conditionaltoxvalue@gmail.com</a>.</p>
</div>
</div>
</ul>
</div>
</div>
</nav>
<div id="results" title="Results">
<div id="resultss" title="Results">
<p></p>
</div>
</div>
<div class="container">
<div id="spinner" class="spinner" style="display:none;">
<p align="center">
<img id="img-spinner" src="images/ajax-loader.gif" alt="Loading ..." />
Please wait, the analysis may last up to 2 minutes.
<div id="show_content">...</div>
</p>
</div>
<div class="body-content">
<div class="row" id="step1">
<div>
<div id="single_compound">
<h2>Step 1</h2>
<div class="row">
<div class="col-md-6 col-sm-12">
<p>
<b>Enter compound name, CASRN, or SMILES below. Compounds will be searched using <a href="http://www.chemspider.com/" target="_blank">ChemSpider.</a> Mixtures, inorganic compounds, and metallic compounds cannot be predicted by CTV.</b>
</p>
<textarea rows="3" cols="10" id="compoundNames" class="form-control" placeholder="Enter compound name OR SMILES OR CAS Registry Number"></textarea>
</div>
<div class="col-md-6 col-sm-12">
<div id="jsme_applet" class="row">
<div id="draw_structure" class="col-md-8">
<div id="jsme_container"></div>
</div>
<div class="col-md-8">
<button type="button" class="btn btn-customctv" onclick='getSmiles();'>Get smiles</button>
</div>
</div>
</div>
<p></p>
</div>
<div class="row" align="right">
<a class="btn btn-default" id="multi_compounds">Multiple compounds</a>
<button type="submit" id="compoundSearch" class="btn btn-default btn-primary">Search</button>
</div>
</div>
<div id="inputfile" style="display:none;">
<h2>Step 1</h2>
<p><b>Upload a CSV file with a maximum of 10 smile strings. Compounds will NOT be validated, so please ensure smiles strings are accurate. Mixtures, inorganic compounds, and metallic compounds cannot be predicted by CTV.</b>
</p>
<fieldset>
<p></p>
<form id="form1" action="fileValidator-catch.php" method="post" enctype="multipart/form-data" target="uploader_iframe">
<input id="file" type="file" name="file" />
<br/>
<a class="btn btn-primary btn-customctv" id="cancel_multiple">Cancel</a>
<input class="btn btn-default" id="submit" type="submit" value="Search" />
</p>
</form>
</fieldset>
</div>
</div>
</div>
<div class="row" id="step2" style="display:none;">
<div class="col-lg-4">
<h2>Step 2</h2>
<div id="ctvInfo">
</div>
<div id="reset_check" style="display:none;">
<p align="right">
<a class="btn btn-default" id="reset_results">Reset</a>
</p>
</div>
<div id="select_check" style="display:none; width: 100%;">
<p align="right">
<a class="btn btn-default" id="cancel_search">Cancel</a>
<a class="btn btn-primary btn-customctv" id="enable_check">Select</a>
</p>
</div>
<div id="file_check" style="display:none; width: 100%;">
<p align="right">
<a class="btn btn-default" id="cancel_file">Cancel</a>
<a class="btn btn-primary btn-customctv" id="enable_model">Continue</a>
</p>
</div>
</div>
</div>
<div class="row" id="step3" style="display:none;">
<div id="stepper" class="col-lg-4">
<h2>Step 3</h2>
<label id="steptwoinstructions"><b> Select compound above before continuing </b>
</label>
<div id="steptwo" style="display:none;">
<p>Select toxicity value. You can select multiple toxicity values </p>
<p>Each toxicity value is predicted using QSAR modeling (specifically, Random Forest with CDK and ISIDA descriptors)</p>
<input type="checkbox" id="Ref_dose" disabled="disabled" value="Ref_dose1"> CTV Reference Dose
<br>
<input type="checkbox" id="Ref_conc" disabled="disabled" value="Ref_conc1"> CTV Reference Concentration
<BR>
<input type="checkbox" id="Oral_slope" disabled="disabled" value="Oral_slope1"> CTV Oral Slope Factor
<br>
<input type="checkbox" id="Ihal_unit" disabled="disabled" value="Ihal_unit1"> CTV Inhalation Unit Risk
<BR>
<input type="checkbox" id="Canc_pot" disabled="disabled" value="Canc_pot1"> CTV Cancer Potency Value
<BR>
<input type="checkbox" id="NOAEL" disabled="disabled" value="NOAEL1"> CTV Oral No-Observed-Adverse-Effect-Level
<br>
<input type="checkbox" id="ONBD" disabled="disabled" value="ONBD1"> CTV Oral Noncancer Benchmark Dose
<BR>
<input type="checkbox" id="OCBD" disabled="disabled" value="OCBD1"> CTV Oral Cancer Benchmark Dose
<BR>
<p></p>
</div>
<div id="scompoundSubmit" style="display:none;" align="right">
<p>
<i>(Please allow up to 2 mins for the analysis to run)</i>
<a class="btn btn-default" id="returnStep2s">Cancel</a>
<button type="submit" id="Run" class="btn btn-default btn-primary">Run</button>
</p>
</div>
<div id="mcompoundSubmit" style="display:none;" align="right">
<p>
<i>(Please allow up to 5 mins for the analysis to run)</i>
<a class="btn btn-default" id="returnStep2c">Cancel</a>
<button type="submit" id="Runfile" class="btn btn-default btn-primary">Run</button>
</p>
</div>
</div>
</div>
<hr>
<footer>
<p>© Company 2015</p>
</footer>
</div>
</div>
</body>
</html>