environment.yml

name: synthex
channels:
  - defaults
dependencies:
  - _libgcc_mutex=0.1=main
  - _openmp_mutex=5.1=1_gnu
  - ca-certificates=2022.07.19=h06a4308_0
  - certifi=2022.6.15=py38h06a4308_0
  - ld_impl_linux-64=2.38=h1181459_1
  - libffi=3.3=he6710b0_2
  - libgcc-ng=11.2.0=h1234567_1
  - libgomp=11.2.0=h1234567_1
  - libstdcxx-ng=11.2.0=h1234567_1
  - ncurses=6.3=h5eee18b_3
  - openssl=1.1.1q=h7f8727e_0
  - pip=22.1.2=py38h06a4308_0
  - python=3.8.13=h12debd9_0
  - readline=8.1.2=h7f8727e_1
  - setuptools=61.2.0=py38h06a4308_0
  - sqlite=3.38.5=hc218d9a_0
  - tk=8.6.12=h1ccaba5_0
  - wheel=0.37.1=pyhd3eb1b0_0
  - xz=5.2.5=h7f8727e_1
  - zlib=1.2.12=h7f8727e_2
  - pip:
    - absl-py==1.2.0
    - argparse==1.4.0
    - batchgenerators==0.24
    - cachetools==5.2.0
    - charset-normalizer==2.1.0
    - contextlib2==21.6.0
    - cycler==0.11.0
    - dicom2nifti==2.4.3
    - fonttools==4.34.4
    - future==0.18.2
    - google-auth==2.9.1
    - google-auth-oauthlib==0.4.6
    - grpcio==1.47.0
    - h5py==3.7.0
    - idna==3.3
    - imageio==2.21.0
    - imgaug==0.4.0
    - importlib-metadata==4.12.0
    - joblib==1.1.0
    - kiwisolver==1.4.4
    - linecache2==1.0.0
    - markdown==3.4.1
    - markupsafe==2.1.1
    - matplotlib==3.5.2
    - medpy==0.4.0
    - ml-collections==0.1.1
    - networkx==2.8.5
    - nibabel==4.0.1
    - numpy==1.23.1
    - oauthlib==3.2.0
    - opencv-python==4.6.0.66
    - packaging==21.3
    - pandas==1.4.3
    - pillow==9.2.0
    - protobuf==3.19.4
    - pyasn1==0.4.8
    - pyasn1-modules==0.2.8
    - pydicom==2.3.0
    - pyparsing==3.0.9
    - python-dateutil==2.8.2
    - python-gdcm==3.0.14
    - pytz==2022.1
    - pywavelets==1.3.0
    - pyyaml==6.0
    - requests==2.28.1
    - requests-oauthlib==1.3.1
    - rsa==4.9
    - scikit-image==0.19.3
    - scikit-learn==1.1.1
    - scipy==1.9.0
    - shapely==1.8.2
    - simpleitk==2.1.1.2
    - six==1.16.0
    - sklearn==0.0
    - tensorboard==2.9.1
    - tensorboard-data-server==0.6.1
    - tensorboard-plugin-wit==1.8.1
    - threadpoolctl==3.1.0
    - tifffile==2022.7.31
    - torch==1.12.0
    - torchvision==0.13.0
    - tqdm==4.64.0
    - traceback2==1.4.0
    - typing-extensions==4.3.0
    - unittest2==1.1.0
    - urllib3==1.26.11
    - werkzeug==2.2.1
    - zipp==3.8.1