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Updating anvil-edge README for edge-25-01-01-06-12-1
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7 changes: 7 additions & 0 deletions
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reports/anvil-edge/tool-tests/edge-25-01-01-06-12-1/chunk.json
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,7 @@ | ||
| { | ||
| "4": { | ||
| "run1": "https://htmlpreview.github.io/?https://github.com/anvilproject/galaxy-tests/blob/main/reports/anvil-edge/tool-tests/edge-25-01-01-06-12-1/results.html", | ||
| "date1": "Wed Jan 01 06:27:42 2025", | ||
| "tools": "https://github.com/anvilproject/galaxy-tests/blob/main/reports/anvil-edge/tool-tests/edge-25-01-01-06-12-1/tools.yml" | ||
| } | ||
| } |
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reports/anvil-edge/tool-tests/edge-25-01-01-06-12-1/chunk.txt
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,23 @@ | ||
| -t bedtools --tool-version ce3c7f062223 | ||
| -t bedtools --tool-version 07e8b80f278c | ||
| -t deeptools_correct_gc_bias --tool-version 2c37ce318bc3 | ||
| -t fasta_compute_length --tool-version 7d37cfda8e00 | ||
| -t pygenometracks --tool-version 2824d77cd8f8 | ||
| -t mummer_dnadiff --tool-version 60698466facd | ||
| -t poretools_yield_plot --tool-version ca22d8497db5 | ||
| -t deseq2 --tool-version 6a3a025714d3 | ||
| -t bamtools_split --tool-version 9676127a1ed2 | ||
| -t samtool_filter2 --tool-version 649a225999a5 | ||
| -t music_deconvolution --tool-version 2ba99a52bd44 | ||
| -t raceid_filtnormconf --tool-version c891d8b33ede | ||
| -t raceid_filtnormconf --tool-version 43c146e25a43 | ||
| -t scanpy_cluster_reduce_dimension --tool-version aaa5da8e73a9 | ||
| -t scanpy_filter_genes --tool-version 7857ea93a011 | ||
| -t scanpy_filter_genes --tool-version a1698b43abeb | ||
| -t sqlite_to_tabular --tool-version bce29ec10b78 | ||
| -t replace_column_by_key_value_file --tool-version d533e4b75800 | ||
| -t jasminesv --tool-version 2b62154e39c8 | ||
| -t bcftools_convert_from_vcf --tool-version b8e9da766b0f | ||
| -t bcftools_plugin_dosage --tool-version 5c232a738c74 | ||
| -t vcfflatten --tool-version f285aa6bdcfb | ||
| -t vcftools_slice --tool-version 1363e5d4a8b8 |
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45
reports/anvil-edge/tool-tests/edge-25-01-01-06-12-1/errors/00ef7a7725e7ce25.json
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| Original file line number | Diff line number | Diff line change |
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| @@ -0,0 +1,45 @@ | ||
| { | ||
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45 changes: 45 additions & 0 deletions
45
reports/anvil-edge/tool-tests/edge-25-01-01-06-12-1/errors/0a4ac9084e71e463.json
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,45 @@ | ||
| { | ||
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45 changes: 45 additions & 0 deletions
45
reports/anvil-edge/tool-tests/edge-25-01-01-06-12-1/errors/13c2fdc9e9517498.json
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,45 @@ | ||
| { | ||
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| "id": "13c2fdc9e9517498", | ||
| "history_id": "6cef2f0590d9373b", | ||
| "tool_id": "upload1", | ||
| "state": "error", | ||
| "exit_code": null, | ||
| "create_time": "2025-01-01T06:43:51.129787", | ||
| "update_time": "2025-01-01T06:44:25.932726", | ||
| "galaxy_version": "24.1", | ||
| "external_id": "gxy-pjwjm", | ||
| "handler": null, | ||
| "job_runner_name": null, | ||
| "command_line": "python '/galaxy/server/database/tools/data_source/upload.py' '/galaxy/server' '/galaxy/server/database/jobs_directory/000/97/registry.xml' '/galaxy/server/database/jobs_directory/000/97/upload_params.json' '108:/galaxy/server/database/objects/1/9/d/dataset_19d2db98-4ca3-4fa4-8537-7f4289f57298_files:/galaxy/server/database/objects/1/9/d/dataset_19d2db98-4ca3-4fa4-8537-7f4289f57298.dat'", | ||
| "user_email": "tests@fake.org", | ||
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| "dbkey": "\"?\"", | ||
| "force_composite": "\"false\"", | ||
| "files": "[{\"NAME\": \"sailfish_quant.sf1.tab\", \"__index__\": 0, \"auto_decompress\": \"Yes\", \"dbkey\": \"\", \"file_data\": \"/galaxy/server/database/tmp/upload_file_data_x4wglxdh\", \"file_type\": \"\", \"ftp_files\": null, \"space_to_tab\": null, \"to_posix_lines\": \"Yes\", \"url_paste\": null, \"uuid\": null}]", | ||
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45 changes: 45 additions & 0 deletions
45
reports/anvil-edge/tool-tests/edge-25-01-01-06-12-1/errors/1a9ebebd29f8ba13.json
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,45 @@ | ||
| { | ||
| "model_class": "Job", | ||
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| "history_id": "6cef2f0590d9373b", | ||
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| "update_time": "2025-01-01T06:43:50.569228", | ||
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| "external_id": "gxy-2hcll", | ||
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| "command_line": "python '/galaxy/server/database/tools/data_source/upload.py' '/galaxy/server' '/galaxy/server/database/jobs_directory/000/90/registry.xml' '/galaxy/server/database/jobs_directory/000/90/upload_params.json' '101:/galaxy/server/database/objects/0/5/9/dataset_059d759e-5217-4c80-a387-93bb580d6b78_files:/galaxy/server/database/objects/0/5/9/dataset_059d759e-5217-4c80-a387-93bb580d6b78.dat'", | ||
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45 changes: 45 additions & 0 deletions
45
reports/anvil-edge/tool-tests/edge-25-01-01-06-12-1/errors/2107f562304292d4.json
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,45 @@ | ||
| { | ||
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45 changes: 45 additions & 0 deletions
45
reports/anvil-edge/tool-tests/edge-25-01-01-06-12-1/errors/283f5b7d430e5c66.json
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,45 @@ | ||
| { | ||
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45 changes: 45 additions & 0 deletions
45
reports/anvil-edge/tool-tests/edge-25-01-01-06-12-1/errors/37143c3c843d96d8.json
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,45 @@ | ||
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| "files": "[{\"NAME\": \"GSM461176_untreat_single.counts\", \"__index__\": 0, \"auto_decompress\": \"Yes\", \"dbkey\": \"\", \"file_data\": \"/galaxy/server/database/tmp/upload_file_data_h7p2l1_6\", \"file_type\": \"\", \"ftp_files\": null, \"space_to_tab\": null, \"to_posix_lines\": \"Yes\", \"url_paste\": null, \"uuid\": null}]", | ||
| "file_count": "\"auto\"", | ||
| "file_type": "\"auto\"" | ||
| }, | ||
| "inputs": {}, | ||
| "outputs": { | ||
| "output0": { | ||
| "id": "e40c30f065154c8b", | ||
| "src": "hda", | ||
| "uuid": "70eccc2d-ca37-4975-b225-3c5458b51e24" | ||
| } | ||
| }, | ||
| "copied_from_job_id": null, | ||
| "output_collections": {}, | ||
| "tool_stdout": "", | ||
| "tool_stderr": "", | ||
| "job_stdout": null, | ||
| "job_stderr": null, | ||
| "stdout": "", | ||
| "stderr": "", | ||
| "job_messages": null, | ||
| "dependencies": [], | ||
| "job_metrics": [] | ||
| } |
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