v0.8.0

github-actions released this 28 Jun 15:08

b11557f

Added

`lightmotif`

lightmotif::pwm::DiscreteMatrix to store a discretized ScoringMatrix.
MatrixElement marker trait for Default + Copy types that can be used as a DenseMatrix element.
lightmotif::scores::Scores wrapper of Vec<T> with shortcut max, threshold and argmax methods.
AVX2 and NEON implementations of Score<u8, Dna> pipeline operation.

Fixed

`lightmotif`

Remove requirement for T: Debug in Clone implementation of DenseMatrix<T>.
SSE2 and AVX2 implementations of Argmax not returning the last index in case of ties.

`lightmotif-tfmpvalue`

Cache internal buffer for Q-values to avoid reallocation between iterations.

Changed

`lightmotif`

Cache the Pipeline used in lightmotif::scan::Scanner.
Make lightmotif::scores::StripedScores generic over the score type.
Make Maximum and Threshold generic over the score type.
Use a discrete matrix in Scanner to quickly eliminate blocks without candidate position above given threshold.
Compile crate without the rand and rand-distr features by default.

`lightmotif-py`

Update pyo3 dependency to v0.22.0.

Assets 2