models.install.yaml

name: model-install

on:
  push:
    branches: [ migrate_processing ]
  pull-request:
    branches: migrate_processing

jobs:
  build:
    runs-on: ${{ matrix.config.os }}
    strategy:
      matrix:
        config:
          - {os: windows-latest, r: 'release'}
    permissions:
      contents: write

    steps:
      - uses: actions/checkout@v3

      - uses: r-lib/actions/setup-r@v2
        with:
          r-version: ${{ matrix.config.r }}
          http-user-agent: ${{ matrix.config.http-user-agent }}
          use-public-rspm: true

      - uses: r-lib/actions/setup-r-dependencies@v2
        with:
          needs: check

      - name: Clone allometric/allometric.
        run: |
          git clone --branch migrate_processing https://github.com/allometric/allometric.git

      - name: Install allometric, generate the models.RDS file.
        run: |
          devtools::install("./allometric", reload = FALSE);
          library(allometric)
          models <- ingest_models(FALSE, pub_path = "./publications", params_path = "./parameters");
          warnings();
          saveRDS(models, "./models.RDS")
        shell: Rscript {0}

      - uses: stefanzweifel/git-auto-commit-action@v5
        with:
          branch: main
          commit_message: Updating models.RDS
          file_pattern: '*.RDS'