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Adding example for tabular data (#117)
* Adding example for tabular dataset
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fedot @ https://github.com/aimclub/FEDOT.git@fi_exp_prep | ||
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# workaround for macos | ||
catboost==1.1.1; sys_platform == 'darwin' | ||
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giotto_tda==0.6.0 | ||
hyperopt==0.2.7 | ||
matplotlib>=3.3.1; python_version >= '3.8' | ||
MKLpy==0.6 | ||
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numpy>=1.16.0, !=1.24.0 | ||
pandas>=1.3.0; python_version >='3.8' | ||
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Pillow==10.0.0 | ||
PyMonad==2.4.0 | ||
PyWavelets==1.4.1 | ||
PyYAML==6.0.1 | ||
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ripser==0.6.4 | ||
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scikit_learn>=1.0.0; python_version >= '3.8' | ||
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scipy~=1.7.3 | ||
sktime==0.16.1 | ||
tensorly==0.8.1 | ||
torch==2.0.0 | ||
torchmetrics==0.11.4 | ||
torchvision==0.15.1 | ||
tensorboard>=2.12.0 | ||
statsforecast==1.5.0 | ||
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chardet | ||
tqdm |
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# -*- coding: utf-8 -*- | ||
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"""scroing_prediction.ipynb | ||
## Imports | ||
""" | ||
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import pandas as pd | ||
from fedot_ind import fedot_api | ||
from sklearn.model_selection import train_test_split | ||
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"""## Opening Data""" | ||
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data = pd.read_csv('scoring_train.csv', index_col=0) | ||
target = 'target' | ||
X_train, X_test, y_train, y_test = train_test_split(data.drop(target, axis=1), data[target], test_size=0.3) | ||
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print('Shape of train', X_train.shape, 'and test', X_test.shape) | ||
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"""## Experiments settings""" | ||
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TIMEOUT = 15 | ||
N_JOBS = 1 | ||
EARLY_STOPPING_TIMEOUT = 45 | ||
METRIC = 'roc_auc' | ||
TUNING = False | ||
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"""## Fedot (master)""" | ||
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automl = fedot_api.Fedot( | ||
problem='classification', | ||
timeout=TIMEOUT, | ||
n_jobs=N_JOBS, | ||
metric=METRIC, | ||
with_tuning=TUNING, | ||
early_stopping_timeout=EARLY_STOPPING_TIMEOUT, | ||
show_progress=True | ||
) | ||
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automl.fit(features=X_train, target=y_train) | ||
automl.predict(features=X_test) | ||
metric_after_1 = automl.get_metrics(target=y_test) | ||
print(metric_after_1) | ||
fedot_industrial_report = automl.return_report() | ||
fedot_industrial_report.head(10) | ||
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"""## Fedot with use_auto_preprocessing (master)""" | ||
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automl = fedot_api.Fedot( | ||
problem='classification', | ||
timeout=TIMEOUT, | ||
n_jobs=N_JOBS, | ||
metric=METRIC, | ||
with_tuning=TUNING, | ||
early_stopping_timeout=EARLY_STOPPING_TIMEOUT, | ||
show_progress=True | ||
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) | ||
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automl.fit(features=X_train, target=y_train) | ||
automl.predict(features=X_test) | ||
metric_after_2 = automl.get_metrics(target=y_test) | ||
print(metric_after_2) | ||
fedot_industrial_report = automl.return_report() | ||
fedot_industrial_report.head(10) | ||
print(automl.history.get_leaderboard()) |
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