diff --git a/.github/workflows/scorecard.yml b/.github/workflows/scorecard.yml new file mode 100644 index 0000000..30d789a --- /dev/null +++ b/.github/workflows/scorecard.yml @@ -0,0 +1,73 @@ +# This workflow uses actions that are not certified by GitHub. They are provided +# by a third-party and are governed by separate terms of service, privacy +# policy, and support documentation. + +name: Scorecard supply-chain security +on: + # For Branch-Protection check. Only the default branch is supported. See + # https://github.com/ossf/scorecard/blob/main/docs/checks.md#branch-protection + branch_protection_rule: + # To guarantee Maintained check is occasionally updated. See + # https://github.com/ossf/scorecard/blob/main/docs/checks.md#maintained + schedule: + - cron: '42 5 * * 2' + push: + branches: [ "master" ] + +# Declare default permissions as read only. +permissions: read-all + +jobs: + analysis: + name: Scorecard analysis + runs-on: ubuntu-latest + permissions: + # Needed to upload the results to code-scanning dashboard. + security-events: write + # Needed to publish results and get a badge (see publish_results below). + id-token: write + # Uncomment the permissions below if installing in a private repository. + # contents: read + # actions: read + + steps: + - name: "Checkout code" + uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # v4.1.1 + with: + persist-credentials: false + + - name: "Run analysis" + uses: ossf/scorecard-action@0864cf19026789058feabb7e87baa5f140aac736 # v2.3.1 + with: + results_file: results.sarif + results_format: sarif + # (Optional) "write" PAT token. Uncomment the `repo_token` line below if: + # - you want to enable the Branch-Protection check on a *public* repository, or + # - you are installing Scorecard on a *private* repository + # To create the PAT, follow the steps in https://github.com/ossf/scorecard-action?tab=readme-ov-file#authentication-with-fine-grained-pat-optional. + # repo_token: ${{ secrets.SCORECARD_TOKEN }} + + # Public repositories: + # - Publish results to OpenSSF REST API for easy access by consumers + # - Allows the repository to include the Scorecard badge. + # - See https://github.com/ossf/scorecard-action#publishing-results. + # For private repositories: + # - `publish_results` will always be set to `false`, regardless + # of the value entered here. + publish_results: true + + # Upload the results as artifacts (optional). Commenting out will disable uploads of run results in SARIF + # format to the repository Actions tab. + - name: "Upload artifact" + uses: actions/upload-artifact@97a0fba1372883ab732affbe8f94b823f91727db # v3.pre.node20 + with: + name: SARIF file + path: results.sarif + retention-days: 5 + + # Upload the results to GitHub's code scanning dashboard (optional). + # Commenting out will disable upload of results to your repo's Code Scanning dashboard + - name: "Upload to code-scanning" + uses: github/codeql-action/upload-sarif@v3 + with: + sarif_file: results.sarif diff --git a/pygad/pygad.py b/pygad/pygad.py index 1c0fe2b..beb0a4d 100644 --- a/pygad/pygad.py +++ b/pygad/pygad.py @@ -1135,9 +1135,8 @@ def __init__(self, # Validate delay_after_gen if type(delay_after_gen) in GA.supported_int_float_types: - if delay_after_gen != 0.0: - if not self.suppress_warnings: - warnings.warn("The 'delay_after_gen' parameter is deprecated starting from PyGAD 3.3.0. To delay or pause the evolution after each generation, assign a callback function/method to the 'on_generation' parameter to adds some time delay.") + if not self.suppress_warnings: + warnings.warn("The 'delay_after_gen' parameter is deprecated starting from PyGAD 3.3.0. To delay or pause the evolution after each generation, assign a callback function/method to the 'on_generation' parameter to adds some time delay.") if delay_after_gen >= 0.0: self.delay_after_gen = delay_after_gen else: @@ -1914,6 +1913,16 @@ def run(self): # Measuring the fitness of each chromosome in the population. Save the fitness in the last_generation_fitness attribute. self.last_generation_fitness = self.cal_pop_fitness() + # Know whether the problem is SOO or MOO. + if type(self.last_generation_fitness[0]) in GA.supported_int_float_types: + # Single-objective problem. + # If the problem is SOO, the parent selection type cannot be nsga2 or tournament_nsga2. + if self.parent_selection_type in ['nsga2', 'tournament_nsga2']: + raise TypeError(f"Incorrect parent selection type. The fitness function returned a single numeric fitness value which means the problem is single-objective. But the parent selection type {self.parent_selection_type} is used which only works for multi-objective optimization problems.") + elif type(self.last_generation_fitness[0]) in [list, tuple, numpy.ndarray]: + # Multi-objective problem. + pass + best_solution, best_solution_fitness, best_match_idx = self.best_solution(pop_fitness=self.last_generation_fitness) # Appending the best solution in the initial population to the best_solutions list.