1.5.2
1.5.2 - 19/9/2022
Protein
- [Bugfix] - #206 Fixes
KeyError
when usinggraphein.protein.edges.distance.node_coords
- [Bugfix] - Includes missing data files in
MANIFEST.in
#205
GRN
- [Bugfix] - #208 - Resolves SSL issues with RegNetwork.
ML
- [Feature] - #208 support for loading local pdb files by
ProteinGraphDataset
andInMemoryProteinGraphDataset
.
by adding a params:
pdb_paths
and set theself.raw_dir
to the root path(self.pdb_path
) of pdb_paths list (the root path should be only one, pdb files should be under the same folder).it allows loading pdb files from the
self.pdb_path
instead of loading fromself.raw
.
If you wish to download from af2 or pdb, just setpdb_paths
toNone
and it goes back to the former version.
CI
- [Bugfix] - #208 explicitly installs
jupyter_contrib_nbextensions
in Docker.