diff --git a/code/qpptk/qpptk/global_manager.py b/code/qpptk/qpptk/global_manager.py index a38c4bc..738dcca 100644 --- a/code/qpptk/qpptk/global_manager.py +++ b/code/qpptk/qpptk/global_manager.py @@ -11,7 +11,7 @@ logger = Config.logger TREC_RES_COLUMNS = ['qid', 'iteration', 'docNo', 'rank', 'docScore', 'method'] -QPP_SCORE_FOR_FAILED_RETRIEVAL = -1000000000 +QPP_SCORE_FOR_FAILED_RETRIEVAL = None def init_proc(*args): kwargs = dict(args) diff --git a/code/qpptk/qpptk/qpptk_main.py b/code/qpptk/qpptk/qpptk_main.py index e094a1b..6870e9a 100644 --- a/code/qpptk/qpptk/qpptk_main.py +++ b/code/qpptk/qpptk/qpptk_main.py @@ -385,7 +385,14 @@ def init_writeable_index(): continue qid_to_preds[i['qid']][k] = v - pd.DataFrame([v for _, v in qid_to_preds.items()]).to_json(results_dir + '/queries.jsonl', lines=True, orient='records') + ret = pd.DataFrame([v for _, v in qid_to_preds.items()]) + min_score = 0 + for _, i in ret.iterrows(): + for j in i: + if j and type(j) == float and j < min_score: + min_score = j + ret = ret.fillna(min_score - 0.01) + ret.to_json(results_dir + '/queries.jsonl', lines=True, orient='records') if args.cleanOutput: for d in os.listdir(args.output): diff --git a/code/qpptk/tests/CustomRunFileForPredictionTest.test_with_run_file_where_one_query_is_highly_effective_approvaltest.approved.jsonl b/code/qpptk/tests/CustomRunFileForPredictionTest.test_with_run_file_where_one_query_is_highly_effective_approvaltest.approved.jsonl index d289f18..f8e3e2d 100644 --- a/code/qpptk/tests/CustomRunFileForPredictionTest.test_with_run_file_where_one_query_is_highly_effective_approvaltest.approved.jsonl +++ b/code/qpptk/tests/CustomRunFileForPredictionTest.test_with_run_file_where_one_query_is_highly_effective_approvaltest.approved.jsonl @@ -1,3 +1,3 @@ {"qid":"1","wig+5":12.4250979385,"nqc+5":0.0004338056,"smv+5":-0.0004338056,"clarity+5+100":2.6993897409,"wig+10":12.4250979385,"nqc+10":0.0004338056,"smv+10":-0.0004338056,"clarity+10+100":2.6993897409,"wig+20":12.4250979385,"nqc+20":0.0004338056,"smv+20":-0.0004338056,"clarity+20+100":2.6993897409,"wig+50":12.4250979385,"nqc+50":0.0004338056,"smv+50":-0.0004338056,"clarity+50+100":2.6993897409,"wig+100":12.4250979385,"nqc+100":0.0004338056,"smv+100":-0.0004338056,"clarity+100+100":2.6993897409,"wig+1000":12.4250979385,"nqc+1000":0.0004338056,"smv+1000":-0.0004338056,"clarity+1000+100":2.6993897409} -{"qid":"2","wig+5":4.2054528045,"nqc+5":0.2547211364,"smv+5":null,"clarity+5+100":2.240679245,"wig+10":4.2054528045,"nqc+10":0.2547211364,"smv+10":null,"clarity+10+100":2.240679245,"wig+20":4.2054528045,"nqc+20":0.2547211364,"smv+20":null,"clarity+20+100":2.240679245,"wig+50":4.2054528045,"nqc+50":0.2547211364,"smv+50":null,"clarity+50+100":2.240679245,"wig+100":4.2054528045,"nqc+100":0.2547211364,"smv+100":null,"clarity+100+100":2.240679245,"wig+1000":4.2054528045,"nqc+1000":0.2547211364,"smv+1000":null,"clarity+1000+100":2.240679245} -{"qid":"3","wig+5":-20.8716444259,"nqc+5":6.6373379689,"smv+5":null,"clarity+5+100":3.2047245641,"wig+10":-20.8716444259,"nqc+10":6.6373379689,"smv+10":null,"clarity+10+100":3.2047245641,"wig+20":-20.8716444259,"nqc+20":6.6373379689,"smv+20":null,"clarity+20+100":3.2047245641,"wig+50":-20.8716444259,"nqc+50":6.6373379689,"smv+50":null,"clarity+50+100":3.2047245641,"wig+100":-20.8716444259,"nqc+100":6.6373379689,"smv+100":null,"clarity+100+100":3.2047245641,"wig+1000":-20.8716444259,"nqc+1000":6.6373379689,"smv+1000":null,"clarity+1000+100":3.2047245641} +{"qid":"2","wig+5":4.2054528045,"nqc+5":0.2547211364,"smv+5":-20.8816444259,"clarity+5+100":2.240679245,"wig+10":4.2054528045,"nqc+10":0.2547211364,"smv+10":-20.8816444259,"clarity+10+100":2.240679245,"wig+20":4.2054528045,"nqc+20":0.2547211364,"smv+20":-20.8816444259,"clarity+20+100":2.240679245,"wig+50":4.2054528045,"nqc+50":0.2547211364,"smv+50":-20.8816444259,"clarity+50+100":2.240679245,"wig+100":4.2054528045,"nqc+100":0.2547211364,"smv+100":-20.8816444259,"clarity+100+100":2.240679245,"wig+1000":4.2054528045,"nqc+1000":0.2547211364,"smv+1000":-20.8816444259,"clarity+1000+100":2.240679245} +{"qid":"3","wig+5":-20.8716444259,"nqc+5":6.6373379689,"smv+5":-20.8816444259,"clarity+5+100":3.2047245641,"wig+10":-20.8716444259,"nqc+10":6.6373379689,"smv+10":-20.8816444259,"clarity+10+100":3.2047245641,"wig+20":-20.8716444259,"nqc+20":6.6373379689,"smv+20":-20.8816444259,"clarity+20+100":3.2047245641,"wig+50":-20.8716444259,"nqc+50":6.6373379689,"smv+50":-20.8816444259,"clarity+50+100":3.2047245641,"wig+100":-20.8716444259,"nqc+100":6.6373379689,"smv+100":-20.8816444259,"clarity+100+100":3.2047245641,"wig+1000":-20.8716444259,"nqc+1000":6.6373379689,"smv+1000":-20.8816444259,"clarity+1000+100":3.2047245641} diff --git a/code/qpptk/tests/TirexIntegrationTest.test_on_cranfield_dataset_with_approvaltests.approved.jsonl b/code/qpptk/tests/TirexIntegrationTest.test_on_cranfield_dataset_with_approvaltests.approved.jsonl index b1984e6..6798a92 100644 --- a/code/qpptk/tests/TirexIntegrationTest.test_on_cranfield_dataset_with_approvaltests.approved.jsonl +++ b/code/qpptk/tests/TirexIntegrationTest.test_on_cranfield_dataset_with_approvaltests.approved.jsonl @@ -85,7 +85,7 @@ {"qid":"132","max-idf":6.551080335,"avg-idf":2.691678484,"scq":193.0767102877,"max-scq":18.7270775768,"avg-scq":14.8520546375,"var":13.7269165759,"max-var":2.2614342106,"avg-var":0.7626064764,"wig+5":1.0434409869,"nqc+5":0.0078827703,"smv+5":0.0071943118,"clarity+5+100":1.6492471341,"wig+10":0.9079225148,"nqc+10":0.0080786537,"smv+10":0.0060651463,"clarity+10+100":1.4755100642,"wig+20":0.7632863246,"nqc+20":0.0083243744,"smv+20":0.0063423692,"clarity+20+100":1.4330077892,"wig+50":0.6004959952,"nqc+50":0.0077708287,"smv+50":0.0054204079,"clarity+50+100":1.3746220699,"wig+100":0.4698041719,"nqc+100":0.0078843319,"smv+100":0.0056502375,"clarity+100+100":1.3032305421,"wig+1000":-0.0568460482,"nqc+1000":0.0095683935,"smv+1000":0.0070174566,"clarity+1000+100":1.0543963552} 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{"qid":"139","max-idf":7.2442275156,"avg-idf":3.4215889592,"scq":86.6696764825,"max-scq":19.6859748596,"avg-scq":14.4449460804,"var":6.33695684,"max-var":2.1362379154,"avg-var":0.792119605,"wig+5":1.4529582115,"nqc+5":0.0135812797,"smv+5":0.012640896,"clarity+5+100":1.6608289436,"wig+10":1.2093611106,"nqc+10":0.0165042048,"smv+10":0.0135998154,"clarity+10+100":1.5976817396,"wig+20":0.9985991135,"nqc+20":0.0165072087,"smv+20":0.0124879026,"clarity+20+100":1.5281295032,"wig+50":0.7658729828,"nqc+50":0.014973304,"smv+50":0.0103246381,"clarity+50+100":1.4209426672,"wig+100":0.5415214861,"nqc+100":0.0165542164,"smv+100":0.0123692492,"clarity+100+100":1.3273313279,"wig+1000":-0.0276073469,"nqc+1000":0.0155604028,"smv+1000":0.0102438351,"clarity+1000+100":1.0841820828} diff --git a/code/qpptk/tests/TirexIntegrationTest.test_on_cranfield_dataset_with_approvaltests_and_bm25_run.approved.jsonl b/code/qpptk/tests/TirexIntegrationTest.test_on_cranfield_dataset_with_approvaltests_and_bm25_run.approved.jsonl index 4ce9151..aa18d0e 100644 --- a/code/qpptk/tests/TirexIntegrationTest.test_on_cranfield_dataset_with_approvaltests_and_bm25_run.approved.jsonl +++ b/code/qpptk/tests/TirexIntegrationTest.test_on_cranfield_dataset_with_approvaltests_and_bm25_run.approved.jsonl @@ -3,18 +3,18 @@ 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+{"qid":"PLAIN-987","max-idf":6.6428592409,"avg-idf":6.6428592409,"scq":19.573103348,"max-scq":19.573103348,"avg-scq":19.573103348,"var":0.0,"max-var":0.0,"avg-var":0.0,"wig+5":4.6795806784,"nqc+5":0.0030866309,"smv+5":0.0027673919,"clarity+5+100":3.8729261346,"wig+10":4.6679987356,"nqc+10":0.0030409337,"smv+10":0.0028219442,"clarity+10+100":3.7883231469,"wig+20":4.6679987356,"nqc+20":0.0030409337,"smv+20":0.0028219442,"clarity+20+100":3.7883231469,"wig+50":4.6679987356,"nqc+50":0.0030409337,"smv+50":0.0028219442,"clarity+50+100":3.7883231469,"wig+100":4.6679987356,"nqc+100":0.0030409337,"smv+100":0.0028219442,"clarity+100+100":3.7883231469,"wig+1000":4.6679987356,"nqc+1000":0.0030409337,"smv+1000":0.0028219442,"clarity+1000+100":3.7883231469} +{"qid":"PLAIN-997","max-idf":-0.0229472068,"avg-idf":-0.0229472068,"scq":-0.0229472068,"max-scq":-0.0229472068,"avg-scq":-0.0229472068,"var":-0.0229472068,"max-var":-0.0229472068,"avg-var":-0.0229472068,"wig+5":-0.0229472068,"nqc+5":-0.0229472068,"smv+5":-0.0229472068,"clarity+5+100":-0.0229472068,"wig+10":-0.0229472068,"nqc+10":-0.0229472068,"smv+10":-0.0229472068,"clarity+10+100":-0.0229472068,"wig+20":-0.0229472068,"nqc+20":-0.0229472068,"smv+20":-0.0229472068,"clarity+20+100":-0.0229472068,"wig+50":-0.0229472068,"nqc+50":-0.0229472068,"smv+50":-0.0229472068,"clarity+50+100":-0.0229472068,"wig+100":-0.0229472068,"nqc+100":-0.0229472068,"smv+100":-0.0229472068,"clarity+100+100":-0.0229472068,"wig+1000":-0.0229472068,"nqc+1000":-0.0229472068,"smv+1000":-0.0229472068,"clarity+1000+100":-0.0229472068} diff --git a/code/qpptk/tests/TwoCustomRunFilesForPredictionTest.test_end_to_end_with_run_01_approval.approved.jsonl b/code/qpptk/tests/TwoCustomRunFilesForPredictionTest.test_end_to_end_with_run_01_approval.approved.jsonl index 91ecf0b..73d3896 100644 --- a/code/qpptk/tests/TwoCustomRunFilesForPredictionTest.test_end_to_end_with_run_01_approval.approved.jsonl +++ b/code/qpptk/tests/TwoCustomRunFilesForPredictionTest.test_end_to_end_with_run_01_approval.approved.jsonl @@ -1,3 +1,3 @@ -{"qid":"1","wig+5":6.9431571325,"nqc+5":0.0433805568,"smv+5":null,"clarity+5+100":2.7431934039,"wig+10":6.9431571325,"nqc+10":0.0433805568,"smv+10":null,"clarity+10+100":2.7431934039,"wig+20":6.9431571325,"nqc+20":0.0433805568,"smv+20":null,"clarity+20+100":2.7431934039,"wig+50":6.9431571325,"nqc+50":0.0433805568,"smv+50":null,"clarity+50+100":2.7431934039,"wig+100":6.9431571325,"nqc+100":0.0433805568,"smv+100":null,"clarity+100+100":2.7431934039,"wig+1000":6.9431571325,"nqc+1000":0.0433805568,"smv+1000":null,"clarity+1000+100":2.7431934039} -{"qid":"2","wig+5":3.8721194712,"nqc+5":0.1470633166,"smv+5":null,"clarity+5+100":2.3208312544,"wig+10":3.8721194712,"nqc+10":0.1470633166,"smv+10":null,"clarity+10+100":2.3208312544,"wig+20":3.8721194712,"nqc+20":0.1470633166,"smv+20":null,"clarity+20+100":2.3208312544,"wig+50":3.8721194712,"nqc+50":0.1470633166,"smv+50":null,"clarity+50+100":2.3208312544,"wig+100":3.8721194712,"nqc+100":0.1470633166,"smv+100":null,"clarity+100+100":2.3208312544,"wig+1000":3.8721194712,"nqc+1000":0.1470633166,"smv+1000":null,"clarity+1000+100":2.3208312544} -{"qid":"3","wig+5":4.8199019572,"nqc+5":0.0,"smv+5":null,"clarity+5+100":2.361615051,"wig+10":4.8199019572,"nqc+10":0.0,"smv+10":null,"clarity+10+100":2.361615051,"wig+20":4.8199019572,"nqc+20":0.0,"smv+20":null,"clarity+20+100":2.361615051,"wig+50":4.8199019572,"nqc+50":0.0,"smv+50":null,"clarity+50+100":2.361615051,"wig+100":4.8199019572,"nqc+100":0.0,"smv+100":null,"clarity+100+100":2.361615051,"wig+1000":4.8199019572,"nqc+1000":0.0,"smv+1000":null,"clarity+1000+100":2.361615051} +{"qid":"1","wig+5":6.9431571325,"nqc+5":0.0433805568,"smv+5":-0.01,"clarity+5+100":2.7431934039,"wig+10":6.9431571325,"nqc+10":0.0433805568,"smv+10":-0.01,"clarity+10+100":2.7431934039,"wig+20":6.9431571325,"nqc+20":0.0433805568,"smv+20":-0.01,"clarity+20+100":2.7431934039,"wig+50":6.9431571325,"nqc+50":0.0433805568,"smv+50":-0.01,"clarity+50+100":2.7431934039,"wig+100":6.9431571325,"nqc+100":0.0433805568,"smv+100":-0.01,"clarity+100+100":2.7431934039,"wig+1000":6.9431571325,"nqc+1000":0.0433805568,"smv+1000":-0.01,"clarity+1000+100":2.7431934039} +{"qid":"2","wig+5":3.8721194712,"nqc+5":0.1470633166,"smv+5":-0.01,"clarity+5+100":2.3208312544,"wig+10":3.8721194712,"nqc+10":0.1470633166,"smv+10":-0.01,"clarity+10+100":2.3208312544,"wig+20":3.8721194712,"nqc+20":0.1470633166,"smv+20":-0.01,"clarity+20+100":2.3208312544,"wig+50":3.8721194712,"nqc+50":0.1470633166,"smv+50":-0.01,"clarity+50+100":2.3208312544,"wig+100":3.8721194712,"nqc+100":0.1470633166,"smv+100":-0.01,"clarity+100+100":2.3208312544,"wig+1000":3.8721194712,"nqc+1000":0.1470633166,"smv+1000":-0.01,"clarity+1000+100":2.3208312544} +{"qid":"3","wig+5":4.8199019572,"nqc+5":0.0,"smv+5":-0.01,"clarity+5+100":2.361615051,"wig+10":4.8199019572,"nqc+10":0.0,"smv+10":-0.01,"clarity+10+100":2.361615051,"wig+20":4.8199019572,"nqc+20":0.0,"smv+20":-0.01,"clarity+20+100":2.361615051,"wig+50":4.8199019572,"nqc+50":0.0,"smv+50":-0.01,"clarity+50+100":2.361615051,"wig+100":4.8199019572,"nqc+100":0.0,"smv+100":-0.01,"clarity+100+100":2.361615051,"wig+1000":4.8199019572,"nqc+1000":0.0,"smv+1000":-0.01,"clarity+1000+100":2.361615051} diff --git a/code/qpptk/tests/TwoCustomRunFilesForPredictionTest.test_end_to_end_with_run_02_approval.approved.jsonl b/code/qpptk/tests/TwoCustomRunFilesForPredictionTest.test_end_to_end_with_run_02_approval.approved.jsonl index 73247a0..a92e7e3 100644 --- a/code/qpptk/tests/TwoCustomRunFilesForPredictionTest.test_end_to_end_with_run_02_approval.approved.jsonl +++ b/code/qpptk/tests/TwoCustomRunFilesForPredictionTest.test_end_to_end_with_run_02_approval.approved.jsonl @@ -1,3 +1,3 @@ -{"qid":"1","wig+5":6.9431571325,"nqc+5":0.0433805568,"smv+5":null,"clarity+5+100":2.7431934039,"wig+10":6.9431571325,"nqc+10":0.0433805568,"smv+10":null,"clarity+10+100":2.7431934039,"wig+20":6.9431571325,"nqc+20":0.0433805568,"smv+20":null,"clarity+20+100":2.7431934039,"wig+50":6.9431571325,"nqc+50":0.0433805568,"smv+50":null,"clarity+50+100":2.7431934039,"wig+100":6.9431571325,"nqc+100":0.0433805568,"smv+100":null,"clarity+100+100":2.7431934039,"wig+1000":6.9431571325,"nqc+1000":0.0433805568,"smv+1000":null,"clarity+1000+100":2.7431934039} -{"qid":"2","wig+5":3.7054528045,"nqc+5":0.1559842027,"smv+5":null,"clarity+5+100":3.2054528045,"wig+10":3.7054528045,"nqc+10":0.1559842027,"smv+10":null,"clarity+10+100":3.2054528045,"wig+20":3.7054528045,"nqc+20":0.1559842027,"smv+20":null,"clarity+20+100":3.2054528045,"wig+50":3.7054528045,"nqc+50":0.1559842027,"smv+50":null,"clarity+50+100":3.2054528045,"wig+100":3.7054528045,"nqc+100":0.1559842027,"smv+100":null,"clarity+100+100":3.2054528045,"wig+1000":3.7054528045,"nqc+1000":0.1559842027,"smv+1000":null,"clarity+1000+100":3.2054528045} -{"qid":"3","wig+5":5.1734553478,"nqc+5":0.0733528179,"smv+5":null,"clarity+5+100":2.69519388,"wig+10":5.1734553478,"nqc+10":0.0733528179,"smv+10":null,"clarity+10+100":2.69519388,"wig+20":5.1734553478,"nqc+20":0.0733528179,"smv+20":null,"clarity+20+100":2.69519388,"wig+50":5.1734553478,"nqc+50":0.0733528179,"smv+50":null,"clarity+50+100":2.69519388,"wig+100":5.1734553478,"nqc+100":0.0733528179,"smv+100":null,"clarity+100+100":2.69519388,"wig+1000":5.1734553478,"nqc+1000":0.0733528179,"smv+1000":null,"clarity+1000+100":2.69519388} +{"qid":"1","wig+5":6.9431571325,"nqc+5":0.0433805568,"smv+5":-0.01,"clarity+5+100":2.7431934039,"wig+10":6.9431571325,"nqc+10":0.0433805568,"smv+10":-0.01,"clarity+10+100":2.7431934039,"wig+20":6.9431571325,"nqc+20":0.0433805568,"smv+20":-0.01,"clarity+20+100":2.7431934039,"wig+50":6.9431571325,"nqc+50":0.0433805568,"smv+50":-0.01,"clarity+50+100":2.7431934039,"wig+100":6.9431571325,"nqc+100":0.0433805568,"smv+100":-0.01,"clarity+100+100":2.7431934039,"wig+1000":6.9431571325,"nqc+1000":0.0433805568,"smv+1000":-0.01,"clarity+1000+100":2.7431934039} +{"qid":"2","wig+5":3.7054528045,"nqc+5":0.1559842027,"smv+5":-0.01,"clarity+5+100":3.2054528045,"wig+10":3.7054528045,"nqc+10":0.1559842027,"smv+10":-0.01,"clarity+10+100":3.2054528045,"wig+20":3.7054528045,"nqc+20":0.1559842027,"smv+20":-0.01,"clarity+20+100":3.2054528045,"wig+50":3.7054528045,"nqc+50":0.1559842027,"smv+50":-0.01,"clarity+50+100":3.2054528045,"wig+100":3.7054528045,"nqc+100":0.1559842027,"smv+100":-0.01,"clarity+100+100":3.2054528045,"wig+1000":3.7054528045,"nqc+1000":0.1559842027,"smv+1000":-0.01,"clarity+1000+100":3.2054528045} +{"qid":"3","wig+5":5.1734553478,"nqc+5":0.0733528179,"smv+5":-0.01,"clarity+5+100":2.69519388,"wig+10":5.1734553478,"nqc+10":0.0733528179,"smv+10":-0.01,"clarity+10+100":2.69519388,"wig+20":5.1734553478,"nqc+20":0.0733528179,"smv+20":-0.01,"clarity+20+100":2.69519388,"wig+50":5.1734553478,"nqc+50":0.0733528179,"smv+50":-0.01,"clarity+50+100":2.69519388,"wig+100":5.1734553478,"nqc+100":0.0733528179,"smv+100":-0.01,"clarity+100+100":2.69519388,"wig+1000":5.1734553478,"nqc+1000":0.0733528179,"smv+1000":-0.01,"clarity+1000+100":2.69519388} diff --git a/code/qpptk/tests/custom_run_file_for_prediction_test.py b/code/qpptk/tests/custom_run_file_for_prediction_test.py index b03bd15..41d54dc 100644 --- a/code/qpptk/tests/custom_run_file_for_prediction_test.py +++ b/code/qpptk/tests/custom_run_file_for_prediction_test.py @@ -24,13 +24,13 @@ def test_with_run_file_where_one_query_is_highly_effective(self): self.assertEqual(actual.iloc[1].to_dict()['qid'], 2.0) self.assertEqual(actual.iloc[1].to_dict()['wig+10'], 4.2054528045) self.assertEqual(actual.iloc[1].to_dict()['nqc+100'], 0.2547211364) - self.assertEqual(str(actual.iloc[1].to_dict()['smv+100']), 'nan') + self.assertEqual(actual.iloc[1].to_dict()['smv+100'], -20.8816444259) self.assertEqual(actual.iloc[1].to_dict()['clarity+1000+100'], 2.240679245) self.assertEqual(actual.iloc[2].to_dict()['qid'], 3.0) self.assertEqual(actual.iloc[2].to_dict()['wig+10'], -20.8716444259) self.assertEqual(actual.iloc[2].to_dict()['nqc+100'], 6.6373379689) - self.assertEqual(str(actual.iloc[2].to_dict()['smv+100']), 'nan') + self.assertEqual(actual.iloc[2].to_dict()['smv+100'], -20.8816444259) self.assertEqual(actual.iloc[2].to_dict()['clarity+1000+100'], 3.2047245641) def test_with_run_file_where_one_query_is_highly_effective_approvaltest(self): diff --git a/code/qpptk/tests/tirex_integration_test.py b/code/qpptk/tests/tirex_integration_test.py index c62539b..d9cabe2 100644 --- a/code/qpptk/tests/tirex_integration_test.py +++ b/code/qpptk/tests/tirex_integration_test.py @@ -5,6 +5,24 @@ import tempfile class TirexIntegrationTest(unittest.TestCase): + def test_on_nfcorpus_dataset_with_approvaltests(self): + tira = Client() + index_dir = tira.get_run_output('ir-benchmarks/tira-ir-starter/Index (tira-ir-starter-pyterrier)', 'nfcorpus-test-20230107-training') + '/index' + queries = tira.download_dataset('ir-benchmarks', 'nfcorpus-test-20230107-training') + '/queries.jsonl' + + with tempfile.TemporaryDirectory() as out_dir, tempfile.TemporaryDirectory() as stats_dir: + args = parse_args([ + '-ti', index_dir, + '--jsonl_queries', queries, + '--output', out_dir, + '--stats_index_path', stats_dir, + '--predict', '--retrieve', '--cleanOutput' + ]) + main(args) + + # I only spot-checked that the output looks reasonable, no in-depth tests + verify_file(out_dir + '/queries.jsonl') + def test_on_cranfield_dataset_with_approvaltests(self): tira = Client() index_dir = tira.get_run_output('ir-benchmarks/tira-ir-starter/Index (tira-ir-starter-pyterrier)', 'cranfield-20230107-training') + '/index' diff --git a/code/qpptk/tests/two_custom_run_files_for_prediction_test.py b/code/qpptk/tests/two_custom_run_files_for_prediction_test.py index dda8b8f..37da429 100644 --- a/code/qpptk/tests/two_custom_run_files_for_prediction_test.py +++ b/code/qpptk/tests/two_custom_run_files_for_prediction_test.py @@ -44,19 +44,19 @@ def test_end_to_end_with_run_01(self): self.assertEqual(actual.iloc[0].to_dict()['qid'], 1.0) self.assertEqual(actual.iloc[0].to_dict()['wig+10'], 6.9431571325) self.assertEqual(actual.iloc[0].to_dict()['nqc+100'], 0.043380556800000004) - self.assertEqual(str(actual.iloc[0].to_dict()['smv+100']), 'nan') + self.assertEqual(actual.iloc[0].to_dict()['smv+100'], -0.01) self.assertEqual(actual.iloc[0].to_dict()['clarity+1000+100'], 2.7431934039) self.assertEqual(actual.iloc[1].to_dict()['qid'], 2.0) self.assertEqual(actual.iloc[1].to_dict()['wig+10'], 3.8721194712) self.assertEqual(actual.iloc[1].to_dict()['nqc+100'], 0.1470633166) - self.assertEqual(str(actual.iloc[1].to_dict()['smv+100']), 'nan') + self.assertEqual(actual.iloc[1].to_dict()['smv+100'], -0.01) self.assertEqual(actual.iloc[1].to_dict()['clarity+1000+100'], 2.3208312544) self.assertEqual(actual.iloc[2].to_dict()['qid'], 3.0) self.assertEqual(actual.iloc[2].to_dict()['wig+10'], 4.8199019572) self.assertEqual(actual.iloc[2].to_dict()['nqc+100'], 0.0) - self.assertEqual(str(actual.iloc[2].to_dict()['smv+100']), 'nan') + self.assertEqual(actual.iloc[2].to_dict()['smv+100'], -0.01) self.assertEqual(actual.iloc[2].to_dict()['clarity+1000+100'], 2.3616150510000002) def test_end_to_end_with_run_01_approval(self): diff --git a/docker/Dockerfile b/docker/Dockerfile index ff1ff39..f9e28f9 100644 --- a/docker/Dockerfile +++ b/docker/Dockerfile @@ -1,6 +1,6 @@ # docker build -f docker/Dockerfile -t mam10eks/qpptk:0.0.1 . # We start from an image that already has all dependencies installed -FROM mam10eks/qpptk:0.0.1-dev +FROM mam10eks/qpptk:0.0.2-dev COPY code/qpptk/ /workspaces/QPP-EnhancedEval/code/qpptk