Encounter Complex-based Normal Mode Analysis for Proteins
Please cite:
Oliwa, T. and Shen, Y. (2015). cNMA: a framework of encounter complex-based normal mode analysis to model conformational changes in protein interactions. Bioinformatics, 31(12), i151-i160.
Chen, H., Sun, Y., and Shen, Y. Predicting protein conformational changes for unbound and homology docking: Learning from intrinsic and induced flexibility. Proteins: Structure, Function, and Bioinformatics, epub ahead of print, 10.1002/prot.25212
Yue Cao and Yang Shen, Bayesian active learning for optimization and uncertainty quantification in protein docking, arXiv preprint arXiv:1902.00067, 2019
Version 1.0.0 Sep. 12 2016
Version 1.1.0 Mar. 29 2018
Version 1.1.1 Apr. 5 2018
Version 1.1.2 Mar. 27 2019