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Copy pathForensicXYSTR_v1.1.bed
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ForensicXYSTR_v1.1.bed
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Chrom ChromStart ChromEnd Name Repeat_unit_length Motif Ref_hap_length Ref_allele Stutter_ratio_threshold Ploidy Inner_offset
chrY 3263110 3263158 DYS393 4 [AGAT]n 48 12 0.25 1 0
chrY 3772789 3772837 DYS505 4 [TCCT]n 48 12 0.25 1 0
chrY 4402918 4402978 DYS456 4 [AGAT]n 60 15 0.25 1 0
chrY 6993189 6993257 DYS570 4 [TTTC]n 68 17 0.25 1 0
chrY 7185317 7185385 DYS576 4 [AAAG]n 68 17 0.25 1 0
chrY 7547584 7547624 DYS522 4 [ATAG]n 40 10 0.25 1 0
chrY 7999838 7999902 DYS458 4 [GAAA]n 64 16 0.25 1 0
chrY 8349973 8350139 DYS449 4 [TTCT]n N22 [TTCT]n N12 [TTCT]n 166 33 0.25 1 34
chrY 8558336 8558402 DYS481 3 [CTT]n 66 22 0.25 1 0
chrY 8781943 8782149 DYS627 4 [AGAA]n N16 [AGAG]n [AAAG]n N82 [AAGG]n 206 27 0.25 1 98
chrY 9684379 9684443 DYS19 4 [TCTA]n ccta [TCTA]n 64 15 0.25 1 4
chrY 11982088 11982132 DYS391 4 [TCTA]n 44 11 0.25 1 0
chrY 12258859 12258951 DYS635 4 [TAGA]n [TACA]n [TAGA]n [TACA]n [TAGA]n [TACA]n [TAGA]n 92 23 0.25 1 0
chrY 12346266 12346326 DYS437 4 [TCTA]n [TCTG]n [TCTA]n 60 15 0.25 1 0
chrY 12403516 12403564 DYS439 4 [GATA]n 48 12 0.25 1 0
chrY 12500447 12500611 DYS389II 4 [TAGA]n [CAGA]n N48 [TAGA]n [CAGA]n 164 29 0.25 1 48
chrY 12500447 12500495 DYS389I 4 [TAGA]n [CAGA]n 48 12 0.25 1 0
chrY 12825888 12825948 DYS438 5 [TTTTC]n 60 12 0.25 1 0
chrY 13640727 13640835 DYS612 3 [CCT]n CTT [TCT]n CCT [TCT]n 108 36 0.25 1 0
chrY 15163066 15163162 DYS390 4 [TAGA]n CAGA [TAGA]n [CAGA]n 96 24 0.25 1 0
chrY 15207987 15208188 DYS518 4 [AAAG]n GAAG [AAAG]n GGAG [AAAG]n gaagag [AAAG]n N27 [AAGG]n 201 42 0.25 1 33
chrY 15314131 15314186 DYS643 5 [CTTTT]n 55 11 0.25 1 0
chrY 16281348 16281396 DYS533 4 [TATC]n 48 12 0.25 1 0
chrY 16631672 16631720 Y-GATA-H4 4 [TCTA]n 48 12 0.25 1 0
chrY 18639712 18639756 DYS385b 4 [TTTC]n [CTTT]n [GAAA]n [AAAG]n 44 11 0.25 1 0
chrY 18680632 18680688 DYS385a 4 [TTTC]n [CTTT]n [GAAA]n [AAAG]n 14 14 0.25 1 0
chrY 18888803 18888851 DYS460 4 [CTAT]n 48 12 0.25 1 0
chrY 19358337 19358389 DYS549 4 [GATA]n 52 13 0.25 1 0
chrY 20471986 20472025 DYS392 3 [ATA]n 39 13 0.25 1 0
chrY 22218922 22219078 DYS448 6 [AGAGAT]n N42 [AGAGAT]n 156 19 0.25 1 42
chrY 23785360 23785500 DYF387S1-1 4 [AAAG]n GTAG [GAAG]n [AAAG]n GAAG [AAAG]n [GAAG]n [AAAG]n 140 35 0.25 1 0
chrY 25884581 25884725 DYF387S1-2 4 [AAAG]n GTAG [GAAG]n [AAAG]n GAAG [AAAG]n [GAAG]n [AAAG]n 144 36 0.25 1 0
chrX 9338301 9338400 DXS10135 4 [AAGA]n gaaagga [AAGA]n AAAG 99 23 0.25 2 7
chrX 9402261 9402301 DXS8378 4 [ATAG]n 40 10 0.25 2 0
chrX 65435646 65435702 DXS7132 4 [TAGA]n 56 14 0.25 2 0
chrX 67757344 67757400 DXS10074 4 [AAGA]n [AAGG]n [AAGA]n 56 14 0.25 2 0
chrX 134284958 134285038 DXS10103 4 [TAGA]n ctga CAGA [TAGA]n [CAGA]n TAGA 80 19 0.25 2 4
chrX 134481508 134481560 HPRTB 4 [ATCT]n 52 13 0.25 2 0
chrX 150542521 150542589 DXS7423 4 [TGGA]n aggacaga [TGGA]n 68 15 0.25 2 8