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Copy pathForensicCODIS_v1.1.bed
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ForensicCODIS_v1.1.bed
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Chrom ChromStart ChromEnd Name Repeat_unit_length Motif Ref_hap_length Ref_allele Stutter_ratio_threshold Ploidy Inner_offset
chr1 230769615 230769683 D1S1656 4 CCTA [TCTA]n TCA [TCTA]n 68 17 0.25 2 0
chr2 218014858 218014950 D2S1338 4 [GGAA]n GGAC [GGAA]n [GGCA]n 92 23 0.25 2 0
chr2 1489652 1489684 TPOX 4 [AATG]n 32 8 0.25 2 0
chr2 68011946 68011994 D2S441 4 [TCTA]n TCA [TCTA]n 48 12 0.25 2 0
chr3 45540738 45540802 D3S1358 4 [TCTA]n [TCTG]n [TCTA]n 64 16 0.25 2 0
chr4 154587735 154587823 FGA 4 [GGAA]n GGAG [AAAG]n AGAA AAAA [GAAA]n 88 22 0.25 2 0
chr5 123775555 123775599 D5S818 4 [ATCT]n 44 11 0.25 2 0
chr5 150076323 150076375 CSF1PO 4 [ATCT]n 52 13 0.25 2 0
chr7 84160225 84160277 D7S820 4 [TATC]n 52 13 0.25 2 0
chr8 124894864 124894916 D8S1179 4 [TCTA]n [TCTG]n [TCTA]n 52 13 0.25 2 0
chr10 129294243 129294295 D10S1248 4 [GGAA]n 52 13 0.25 2 0
chr11 2171087 2171115 TH01 4 [AATG]n ATG [AATG]n 28 7 0.25 2 0
chr12 5983976 5984044 vWA 4 [TAGA]n [CAGA]n TAGA 68 17 0.25 2 0
chr12 12297019 12297095 D12S391 4 [AGAT]n GA T [AGAT]n [AGAC]n AGAT 76 19 0.25 2 0
chr13 82148024 82148068 D13S317 4 [TATC]n 44 11 0.25 2 0
chr16 86352701 86352745 D16S539 4 [GATA]n 44 11 0.25 2 0
chr18 63281666 63281738 D18S51 4 [AGAA]n AG 72 18 0.25 2 0
chr19 29926234 29926298 D19S433 4 [CCTT]n ccta [CCTT]n cttt [CCTT]n 64 14 0.25 2 8
chr21 19181972 19182099 D21S11 4 [TCTA]n [TCTG]n [TCTA]n ta [TCTA]n tca [TCTA]n tccata [TCTA]n TA [TCTA]n 127 29 0.25 2 11
chr22 37140286 37140337 D22S1045 3 [ATT]n ACT [ATT]n 51 17 0.25 2 0