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sei.yml
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name: sei
channels:
- pytorch
- conda-forge
- bioconda
- defaults
dependencies:
- _libgcc_mutex=0.1=main
- _openmp_mutex=5.1=1_gnu
- _r-mutex=1.0.0=anacondar_1
- bcftools=1.8=h4da6232_3
- binutils_impl_linux-64=2.35.1=h27ae35d_9
- binutils_linux-64=2.35=h67ddf6f_30
- blas=1.0=mkl
- boost-cpp=1.68.0=h11c811c_1000
- bwidget=1.9.11=1
- bzip2=1.0.8=h7f98852_4
- ca-certificates=2023.12.12=h06a4308_0
- cairo=1.16.0=h18b612c_1001
- certifi=2021.5.30=py36h06a4308_0
- cudatoolkit=11.3.1=h2bc3f7f_2
- curl=7.69.1=hbc83047_0
- cycler=0.11.0=pyhd3eb1b0_0
- cython=0.29.24=py36h295c915_0
- dataclasses=0.8=pyh4f3eec9_6
- dbus=1.13.18=hb2f20db_0
- docopt=0.6.2=py36h06a4308_0
- expat=2.4.4=h295c915_0
- ffmpeg=4.2.2=h20bf706_0
- fontconfig=2.13.1=h6c09931_0
- freetype=2.11.0=h70c0345_0
- fribidi=1.0.10=h36c2ea0_0
- gcc_impl_linux-64=7.5.0=hda68d29_13
- gcc_linux-64=7.5.0=h47867f9_30
- gettext=0.19.8.1=hf34092f_1004
- gfortran_impl_linux-64=7.5.0=h56cb351_20
- gfortran_linux-64=7.5.0=h78c8a43_30
- glib=2.66.1=h680cd38_0
- gmp=6.2.1=h2531618_2
- gnutls=3.6.15=he1e5248_0
- graphite2=1.3.13=h58526e2_1001
- gsl=2.4=h14c3975_4
- gst-plugins-base=1.14.0=hbbd80ab_1
- gstreamer=1.14.0=h28cd5cc_2
- gxx_impl_linux-64=7.5.0=h64c220c_13
- gxx_linux-64=7.5.0=h555fc39_30
- h5py=2.10.0=py36hd6299e0_1
- harfbuzz=2.4.0=h37c48d4_1
- hdf5=1.10.6=hb1b8bf9_0
- htseq=0.12.4=py36h0234e80_2
- htslib=1.9=h4da6232_3
- icu=58.2=hf484d3e_1000
- intel-openmp=2022.0.1=h06a4308_3633
- joblib=1.0.1=pyhd3eb1b0_0
- jpeg=9d=h7f8727e_0
- kernel-headers_linux-64=2.6.32=he073ed8_15
- kiwisolver=1.3.1=py36h2531618_0
- krb5=1.17.1=h173b8e3_0
- lame=3.100=h7b6447c_0
- lcms2=2.12=h3be6417_0
- ld_impl_linux-64=2.35.1=h7274673_9
- libcurl=7.69.1=h20c2e04_0
- libdeflate=1.8=h7f8727e_5
- libedit=3.1.20181209=hc058e9b_0
- libffi=3.2.1=hf484d3e_1007
- libgcc=7.2.0=h69d50b8_2
- libgcc-ng=9.3.0=h5101ec6_17
- libgfortran-ng=7.5.0=ha8ba4b0_17
- libgfortran4=7.5.0=ha8ba4b0_17
- libgomp=9.3.0=h5101ec6_17
- libiconv=1.16=h516909a_0
- libidn2=2.3.2=h7f8727e_0
- libopus=1.3.1=h7b6447c_0
- libpng=1.6.37=hbc83047_0
- libprotobuf=3.6.1=hdbcaa40_1001
- libssh2=1.9.0=h1ba5d50_1
- libstdcxx-ng=9.3.0=hd4cf53a_17
- libtasn1=4.16.0=h27cfd23_0
- libtiff=4.2.0=h85742a9_0
- libunistring=0.9.10=h27cfd23_0
- libuuid=1.0.3=h7f8727e_2
- libuv=1.40.0=h7b6447c_0
- libvpx=1.7.0=h439df22_0
- libwebp-base=1.2.2=h7f8727e_0
- libxcb=1.13=h7f98852_1003
- libxml2=2.9.12=h03d6c58_0
- lz4-c=1.9.3=h295c915_1
- make=4.3=hd18ef5c_1
- matplotlib=3.3.4=py36h06a4308_0
- matplotlib-base=3.3.4=py36h62a2d02_0
- mkl=2020.2=256
- mkl-service=2.3.0=py36he8ac12f_0
- mkl_fft=1.3.0=py36h54f3939_0
- mkl_random=1.1.1=py36h0573a6f_0
- ncurses=6.1=he6710b0_1
- nettle=3.7.3=hbbd107a_1
- numpy=1.19.2=py36h54aff64_0
- numpy-base=1.19.2=py36hfa32c7d_0
- olefile=0.46=pyh9f0ad1d_1
- openh264=2.1.1=h780b84a_0
- openjpeg=2.4.0=hb52868f_1
- openssl=1.1.1w=h7f8727e_0
- pandas=1.1.5=py36ha9443f7_0
- pango=1.45.3=hd140c19_0
- patsy=0.5.1=py36_0
- pcre=8.45=h9c3ff4c_0
- pillow=8.2.0=py36ha6010c0_1
- pip=21.3.1=pyhd8ed1ab_0
- pixman=0.38.0=h516909a_1003
- plotly=5.6.0=pyhd3eb1b0_0
- pthread-stubs=0.4=h36c2ea0_1001
- pyfaidx=0.6.4=pyh5e36f6f_0
- pyparsing=3.0.4=pyhd3eb1b0_0
- pyqt=5.9.2=py36h05f1152_2
- pysam=0.11.2.2=py36_1
- pytabix=0.1=py36h61628e2_1
- python=3.6.10=h8356626_1011_cpython
- python-dateutil=2.8.2=pyhd3eb1b0_0
- python_abi=3.6=2_cp36m
- pytorch=1.10.2=py3.6_cuda11.3_cudnn8.2.0_0
- pytorch-mutex=1.0=cuda
- pyyaml=5.4.1=py36h27cfd23_1
- qt=5.9.7=h5867ecd_1
- r-assertthat=0.2.1=r36h6115d3f_0
- r-base=3.6.1=haffb61f_2
- r-cli=1.1.0=r36h6115d3f_0
- r-crayon=1.3.4=r36h6115d3f_0
- r-data.table=1.14.0=r36hcfec24a_0
- r-dplyr=0.8.5=r36h0357c0b_1
- r-ellipsis=0.3.2=r36hcfec24a_0
- r-fansi=0.4.0=r36h96ca727_0
- r-glue=1.3.1=r36h96ca727_0
- r-lifecycle=1.0.0=r36hc72bb7e_0
- r-magrittr=1.5=r36h6115d3f_4
- r-pillar=1.3.1=r36h6115d3f_0
- r-pkgconfig=2.0.2=r36h6115d3f_0
- r-plogr=0.2.0=r36h6115d3f_0
- r-purrr=0.3.2=r36h96ca727_0
- r-r6=2.4.0=r36h6115d3f_0
- r-rcpp=1.0.1=r36h29659fb_0
- r-rlang=0.4.11=r36hcfec24a_0
- r-tibble=2.1.1=r36h96ca727_0
- r-tidyr=1.1.3=r36h03ef668_0
- r-tidyselect=1.1.1=r36hc72bb7e_0
- r-utf8=1.1.4=r36h96ca727_0
- r-vctrs=0.3.8=r36hcfec24a_1
- readline=8.0=h46ee950_1
- samtools=1.9=h10a08f8_12
- scikit-learn=0.24.2=py36ha9443f7_0
- scipy=1.5.2=py36h0b6359f_0
- seaborn=0.11.2=pyhd3eb1b0_0
- seqtk=1.3=h5bf99c6_3
- setuptools=58.0.4=py36h06a4308_0
- sip=4.19.8=py36hf484d3e_0
- six=1.16.0=pyhd3eb1b0_1
- sqlite=3.31.1=h7b6447c_0
- statsmodels=0.12.2=py36h27cfd23_0
- sysroot_linux-64=2.12=he073ed8_15
- tabix=1.11=hdfd78af_0
- tenacity=8.0.1=py36h06a4308_0
- threadpoolctl=2.2.0=pyh0d69192_0
- thrift-cpp=0.12.0=h0a07b25_1002
- tk=8.6.11=h1ccaba5_0
- tktable=2.10=hb7b940f_3
- torchaudio=0.10.2=py36_cu113
- torchvision=0.11.3=py36_cu113
- tornado=6.1=py36h27cfd23_0
- typing_extensions=4.1.1=pyh06a4308_0
- wheel=0.37.1=pyhd3eb1b0_0
- x264=1!157.20191217=h7b6447c_0
- xorg-kbproto=1.0.7=h7f98852_1002
- xorg-libice=1.0.10=h7f98852_0
- xorg-libsm=1.2.2=h470a237_5
- xorg-libx11=1.7.2=h7f98852_0
- xorg-libxau=1.0.9=h7f98852_0
- xorg-libxdmcp=1.1.3=h7f98852_0
- xorg-libxext=1.3.4=h7f98852_1
- xorg-libxrender=0.9.10=h7f98852_1003
- xorg-renderproto=0.11.1=h7f98852_1002
- xorg-xextproto=7.3.0=h7f98852_1002
- xorg-xproto=7.0.31=h7f98852_1007
- xz=5.2.5=h7b6447c_0
- yaml=0.2.5=h7b6447c_0
- zlib=1.2.11=h7f8727e_4
- zstd=1.4.9=haebb681_0
- pip:
- click==8.1.6
- importlib-metadata==6.8.0
- pytz==2023.3
- selene-sdk==0.5.0
- torch==1.9.0
- zipp==3.16.2
prefix: /dssg/home/acct-bioxsyy/bioxsyy-user2/.conda/envs/sei